Gene Noc_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3020 
SymboltrkA 
ID3705767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3414846 
End bp3416219 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content52% 
IMG OID637739494 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_344992 
Protein GI77166467 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TTATTTTAGG TGCAGGCCAA GTAGGCGCCT CGGTAGCGGT TAATCTAGCC 
AGCGAAGCTA ACGATATTAC CCTCGTGGAT ACCAATGGCA AATTACTGCA AAGCCTCCAG
GATCGTTTAG ATATCCGAAC CGTACAAGGC TGGGCCTCCC ATCCCGATGT CCTTGCTCAA
GCCGGCGCTG AAGACACGGA TATGATTGTG GCAGTCACTA GTAGCGATGA AACCAATATG
ATTGCCTGTC AAATCGCCTA TAGCCTGTTT CATACCCCCA CCAAGGTGGC CCGGGTCCGC
GCCGCCGGCT ATTTAGCCTA TCCAGAGTTG TTTTCCACCA AAACCTTACC TATCGACGTG
CTAATCAGCC CGGAGCAACT GGTCACTGAT TATATTAAGC GCTTGATCGA TAATCCAGGT
ACTTTTCAAG TCCTGGACTT CGCCGATGGA AGGGTCCAAT TAGTGGCGGT AAGAGCCTAT
TATGGCGGTT TACTGGTCGG CCACCAGCTC CGGGAATTAT CCGAACACAT CCCCGGCGTA
GAGACTCGGG TAGCGGCCAT CTTCCGCCAA GACAAGTCCA TTTCTCCTCA AGGTAGCACG
GTTATCGAGG CAGATGATGA AGTGTTTTTC ATTGCCGCGC AAAAAGACAT TCCTAAAGTC
ATGGGGGAAC TGCGCCGCTT GGACAATCCC TATAAGCGGA TCATGCTCGG TGGTGGCGGC
AGCATCGGCC AGCGCCTAGC TCAAGCGCTG GAAGAGCACT ATCAAGTTAA AATCATCGAA
ACTGATCCTA AACGGGCACG AGTCCTCTCT GAGGAGCTCC ATAAAAGCAT CGTCCTGCAG
GGCGATGCAG CTAGTGAAGA ACTCCTGCTA GAGGAGAATA TCGAAGATAC GGATATTTAT
TGCGCCTTAA CCAACGATGA TGAAATTAAC ATTCTTTCCG CCATGCTTGC CAAACGGCTA
GGCGCTGGCA AAGTTATGTC CTTAATCAAC CGGGCGGCCT ATGTGGATCT GGTGGAAAGC
GGGGCTGTGG ATATTGCTGT CTCCCCCCAA CAGGCTACCA TTAGCAGCTT GCTGGCTCAC
ATCCGCCATG GCGATGTGGT GGCTGCCCAT TCTTTACGCC GGGGGGCAGC CGAGGCGTTG
GAAGCTGTAG CCCATGGAGA TCCTTCTTCC TCCAAAGTCA TTGGCCGGGC CATTGAAGAG
ATCAAGCTCC CGCCGGGCAC CACTATCGGC GCTATTGCGC GAAATGAAGA AGTGCTGATG
GCCCACCACG ATACAATCAT TGAATCCGGC GATCATGTCA TCTTATTTTT AGTAGACAAG
CACCACGTCC CGGATGTGGA GCGTTTGTTC CAGGTAGGCT TTACTTTCCT CTGA
 
Protein sequence
MKIIILGAGQ VGASVAVNLA SEANDITLVD TNGKLLQSLQ DRLDIRTVQG WASHPDVLAQ 
AGAEDTDMIV AVTSSDETNM IACQIAYSLF HTPTKVARVR AAGYLAYPEL FSTKTLPIDV
LISPEQLVTD YIKRLIDNPG TFQVLDFADG RVQLVAVRAY YGGLLVGHQL RELSEHIPGV
ETRVAAIFRQ DKSISPQGST VIEADDEVFF IAAQKDIPKV MGELRRLDNP YKRIMLGGGG
SIGQRLAQAL EEHYQVKIIE TDPKRARVLS EELHKSIVLQ GDAASEELLL EENIEDTDIY
CALTNDDEIN ILSAMLAKRL GAGKVMSLIN RAAYVDLVES GAVDIAVSPQ QATISSLLAH
IRHGDVVAAH SLRRGAAEAL EAVAHGDPSS SKVIGRAIEE IKLPPGTTIG AIARNEEVLM
AHHDTIIESG DHVILFLVDK HHVPDVERLF QVGFTFL