| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3014 |
|---|
| Symbol | |
|---|
| ID | 3705722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 3407540 |
|---|
| End bp | 3408043 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637739488 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_344986 |
|---|
| Protein GI | 77166461 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAC TGAACATACT GCATTACCCA GATCCCCGAT TGCGGCGGAA AGCCCAACCT
GTGGCTGCCG TTGATAAATC CATAAAAAAG CTTGCCGATG ATATGCTGGA AACGATGTAT
CAGGCTCCAG GTATTGGACT TGCGGCAGTT CAAGTCAATG TTCCTAAACA GGTAGTAGTT
ATTGACATTT CCGAGGATAA ATCCTCTCCG CTAGTTCTCA TCAATCCTGA AATTGTGGCG
CGGCAAGGAA AAGCTGAAAG CGAGGAAGGA TGTCTATCAG TACCTGAAAT CTTTGAGCCA
GTTACCAGGG CTGCGGAAAT TACTGTCCAC TACTTAGACC GTGAGGGTCA AAAACAAGAA
CTCCAAACCC AGGAGCTGCT CGCTACCTGC ATTCAGCATG AGCTAGATCA CCTGGAAGGA
AAGCTTTTTA TCGATTATTT CTCTACTCTC AAACGTCAGC GTATCCGGAA AAAAGCGGAA
AAACGGCAGC GTCTATCCGC CTAA
|
|---|
| Protein sequence | MAILNILHYP DPRLRRKAQP VAAVDKSIKK LADDMLETMY QAPGIGLAAV QVNVPKQVVV
IDISEDKSSP LVLINPEIVA RQGKAESEEG CLSVPEIFEP VTRAAEITVH YLDREGQKQE
LQTQELLATC IQHELDHLEG KLFIDYFSTL KRQRIRKKAE KRQRLSA
|
|---|
| |