Gene Noc_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3009 
Symbol 
ID3705717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3401673 
End bp3402173 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content52% 
IMG OID637739483 
Productphosphoribosylaminoimidazole carboxylase 
Protein accessionYP_344981 
Protein GI77166456 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACC CCTTTGTTGC CGTGCTGATG GGATCGGAAT CGGATTTACC TATTATGCAG 
ACTACCTTGG ACGTATTAAA AACATTAGAA GTGCCTTTTG AGGTGCGGAT CAGTTCTGCC
CACCGAACTC CAGAGGCTAC CGCCCATTAT GTCAAAGAAG CGGATGCCCG TGGCTGTGGG
GTGTTTATTG CTGCGGCTGG GTTAGCAGCT CATCTTGCCG GCGCTGTTGC CGCCAATACC
CTAAAGCCGG TAATTGGGGT GCCCATGGAG GGGGGGCCAT TAAAGGGGAT GGACGCTTTA
TTGTCTACGG TACAGATGCC CGGAGGCGTT CCCGTGGCTT GTGTGGCTAT TGGTAAAGCG
GGGGCAAAAA ACGCCGCTTA TTTGGCAGCC CAAATTTTAG GAATCACAGA TACCGCTCTA
GCTCAGCGTC TTCTTTCGGA TCGCCAAGCC ATGGCTGATG CTATCCTCGC CAAAGCTAAT
GTTTTGGAGC ACCATTCCTG A
 
Protein sequence
MNNPFVAVLM GSESDLPIMQ TTLDVLKTLE VPFEVRISSA HRTPEATAHY VKEADARGCG 
VFIAAAGLAA HLAGAVAANT LKPVIGVPME GGPLKGMDAL LSTVQMPGGV PVACVAIGKA
GAKNAAYLAA QILGITDTAL AQRLLSDRQA MADAILAKAN VLEHHS