Gene Noc_3001 details

Gene Information

• Locus tag: Noc_3001
• ID: 3705709
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 3393657
• End bp: 3394220
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637739475
• Product: hypothetical protein
• Protein accession: YP_344973
• Protein GI: 77166448

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAACG ATTATTTAAC TATCCCCTTG ATTTTTCTTC TTAATACCCT TTTTAGCCTC 
TATATTTTGG CGGTAATGCT ACGCCTATTG CTACAATGGG TACGGGCCAA TTTTCGTAAT 
CCGGTGGCGC AGTTTCTAAT TACTATTACT CAGCCCCTCC TTCGTCCCCT GCGCCGTTTT 
TTGCCCCCTA TGGGCAATAT TGATACGGCT TCCATGTTCC TGCTTCTTAT ACTTACGATG 
GTTAAATTAA CCATCATTTC AAGTTTGGCC CTAAGCGTAC CTCCACTACC CGTGCTGTTG 
CTGGCAAGCA TCGGCGATCT AGTCAGTCTG ACCTTTGATG TTTTCAAAAT CGCCATTTTT 
ATCCAAGTTA TTCTGAGCTG GATAGCGCCC ACTACCTACA ACCCGGTTAC CATACTCTTA 
TATGATCTCA CCGAGCCTCT ATTGCGGCCC GCCCGGAATT TAGTGCCGCC CATCGGAGGT 
TTGGATTTAT CGCCATTAGT GGTTTTGATT GCTCTACAGG TGGCCTCCAT GCTCATTGAG 
CCCTGGTTTC CCCGTATTAT CTAA 

 

Protein sequence

MPNDYLTIPL IFLLNTLFSL YILAVMLRLL LQWVRANFRN PVAQFLITIT QPLLRPLRRF 
LPPMGNIDTA SMFLLLILTM VKLTIISSLA LSVPPLPVLL LASIGDLVSL TFDVFKIAIF 
IQVILSWIAP TTYNPVTILL YDLTEPLLRP ARNLVPPIGG LDLSPLVVLI ALQVASMLIE 
PWFPRII