Gene Noc_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3000 
Symbol 
ID3705708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3393341 
End bp3393649 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content52% 
IMG OID637739474 
Producthypothetical protein 
Protein accessionYP_344972 
Protein GI77166447 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTTC GGTGGTATTG CTGGCAACAG GAAGCGTTAA TCATCCAGAT ACGCCTCCAG 
CCCCGGGCTA AGGGCGATGA AGTTATTGGC CCCCATGGAG ATCGGCTAAA AATACGGATT
ACCGCACCCC CGGTAGAAGG CAAAGCTAAC ACTCATCTGC TCCGCTTCTT GGCTAAAACC
TTCCAGGTTA GCAGAAATCA AGTCTACCTA CTTTCGGGAG CCACCAGCCG GGACAAGCGG
GTGCGTATTG AGAAACCGAC CAAATTACTG CCAGGTATCA CTCCTCCTAT TCGTAAAACA
GTAAGATAG
 
Protein sequence
MAVRWYCWQQ EALIIQIRLQ PRAKGDEVIG PHGDRLKIRI TAPPVEGKAN THLLRFLAKT 
FQVSRNQVYL LSGATSRDKR VRIEKPTKLL PGITPPIRKT VR