Gene Noc_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2998 
SymbolpyrE 
ID3705706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp3391314 
End bp3391976 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID637739472 
Productorotate phosphoribosyltransferase 
Protein accessionYP_344970 
Protein GI77166445 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGCT ATCAAAACGA ATTTATCAAG TTTGCGGTCG AAAAGAGAGT GCTTCGCTTT 
GGGGATTTTA CCCTGAAGTC TGGCCGGATG AGTCCCTACT TTTTTAATAG CGGATTGTTC 
AATAGCGGTG CAAGCTTAGC CCGGCTAGGT CGTTTCTACG CCCAAGCTAT TTCTGGCTCG 
GGGCTTGCTT TCGAGGTGCT TTTTGGACCG GCCTATAAAG GCATCCCCTT AGTGACGGCT 
ACAGCTATTG CATTGATGGA AAAATATGGG CGAGATATAG GGTACGCGTT CAATCGCAAA 
GAGGTCAAGG ATCATGGAGA AGGAGGAAAA GTGGTGGGAA CTCCGCTTAA AGGCGCCCGG 
GTCCTAATCG TCGATGATGT TATTTCCGCC GGCACCTCAG TACGAGAAGC AGCTACTCTT 
ATCCATGCTG CGGGGGCTAC ACTCGCTGGT GTAGCGATTT CCTTGGACCG CCAGGAACAG 
GGTCAAGGGA AACAATCCGC AGTCCAAGAG GTGGAAGCTC AGTACGGTAT CCCCGTGGTA 
AGTATTGCCT GCTTGGACCA TCTGATTCGC CATTTAGAAG AGAAGCCAGA AATGAAAGAA 
CATTTAGATA AAATGCAAGC CTATAAAAAG CAATATGGAG TAGAGAGGGT TTTTAACCCG 
TAA
 
Protein sequence
MKSYQNEFIK FAVEKRVLRF GDFTLKSGRM SPYFFNSGLF NSGASLARLG RFYAQAISGS 
GLAFEVLFGP AYKGIPLVTA TAIALMEKYG RDIGYAFNRK EVKDHGEGGK VVGTPLKGAR 
VLIVDDVISA GTSVREAATL IHAAGATLAG VAISLDRQEQ GQGKQSAVQE VEAQYGIPVV 
SIACLDHLIR HLEEKPEMKE HLDKMQAYKK QYGVERVFNP