| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2988 |
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| Symbol | |
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| ID | 3707467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3379970 |
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| End bp | 3381481 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637739462 |
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| Product | lytic transglycosylase |
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| Protein accession | YP_344960 |
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| Protein GI | 77166435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.351153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTATC CCTTTGCCGT GATTTTTGTA GGTACCTTGC TATTTTTGAC TAACCCCGTC
TTAGCTAAGT CATGGGATTT GTTTCCCCGG CCAGCGATGC TAGAACAAGA TATCCGTTTC
TGGACCCGAG TTTACACTGA AATTGATAAT AATCACGGCT TTATCCATGA TAATCGGTAC
CTTAACGTCA TTTATGAAGT AACTCCCCTG CCTATCCATC TAAGCTCCCA GGCCGCTAAG
AAACACCTTC AGGAGCGGCG GCAATACTAT CAAGGGATCT TGCTTCGCCT TGCCGAAGGC
AAGCGGGATA ATCTTACGGA AGAAGAGCGG CGAGTACTCG CACTTTGGCG GCGGAACGTG
AACGATAAAA CACTCCAGGC CGCCGCCTCA AGGCTCCGTT TCCAGCGGGG GCAGGCAAAT
CGTTTTCGTG AAGGATTAGT CCGCGCTGGC GTCTATAAAC CTTTTATCCT CAAAACTTTG
GATTCCCTCG GCCTACCACG GGAACTTGCC GTATTACCCC ATGTAGAGTC CTCATTTGAC
CCAACCGCCT ATTCCCATGC TGGCGCTGCG GGGCTATGGC AGTTCACCCG TCCCACTGGG
CGCCGTTTTA TGCGCATTGA CCATGTGGTA GATGAACGCC TGGATCCCTT CAAGGCCACG
GTGGCCGCCG CCCGTTTGCT TCAGCATAAC TATGAAAAGA CCGGTACCTG GCCCTTAGCT
ATTACCGCTT ACAATCACGG CGTAGCAGGG ATGCAGCGGG CCAAAAAGCA AATGGAAACC
TCGGATATTG TGGCTATCCG GCAAAATTAT AAAAGCCCTA CTTTTGGTTT TGCCTCGCGT
AATTTTTATG TGGCCTTTCT TGCGGCCTTG GAGGTAGATA CCAACGCAAA ACTTTATTTT
GGCCACTTTC AGGCAGATAA ACCAGTAAAA AGTGAGAGTA TAGAACTTAC TGACTTCGTC
CCTGCTCATG CCCTGCAGCG GGTTTTAGGA CTCGATCAAA CCACGCTCAA ACAAAGCAAT
CCTGCCCTGC TCTCGCCCGT TTGGAAAGGC CATAAATACT TGCCTCGGGG CTATGAGCTA
CGTATACCTT GTACCCCCAC TTGTAGTAGA TCTAAAGTGC TAGCCTATCT AGCCCCTTGG
GAACGATTTG AGAAACAAAT ACCGAATCGT TTTCATAAAG TTCAACAGGG ACAAACCCTA
TCTCATATTG CTCGGCGCTA TCGCATTAAT GTCCATCAGC TAGTAAAATT GAATGGGCTT
ACCAACCGCC ATCACATCCG GATGGGACAA ACCCTACAGC TACCTTTCCC TGCCACTGCA
AACAGAAACC ATATTCGCTC AAAGACTGGG CATTACACGG TGCAACGTGG CGATACGCTT
TCTAGAATTG CCCAACGTTT TGGAATGACC CAGCAAGCAC TCCTAAAAAG CAATGATATT
ACCGATAAAC ATCGAATTTA TGCTGGCCAA AATTTACTGC TAGCACAACT CCCTTCCTCC
TCTGAAAACT AG
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| Protein sequence | MPYPFAVIFV GTLLFLTNPV LAKSWDLFPR PAMLEQDIRF WTRVYTEIDN NHGFIHDNRY
LNVIYEVTPL PIHLSSQAAK KHLQERRQYY QGILLRLAEG KRDNLTEEER RVLALWRRNV
NDKTLQAAAS RLRFQRGQAN RFREGLVRAG VYKPFILKTL DSLGLPRELA VLPHVESSFD
PTAYSHAGAA GLWQFTRPTG RRFMRIDHVV DERLDPFKAT VAAARLLQHN YEKTGTWPLA
ITAYNHGVAG MQRAKKQMET SDIVAIRQNY KSPTFGFASR NFYVAFLAAL EVDTNAKLYF
GHFQADKPVK SESIELTDFV PAHALQRVLG LDQTTLKQSN PALLSPVWKG HKYLPRGYEL
RIPCTPTCSR SKVLAYLAPW ERFEKQIPNR FHKVQQGQTL SHIARRYRIN VHQLVKLNGL
TNRHHIRMGQ TLQLPFPATA NRNHIRSKTG HYTVQRGDTL SRIAQRFGMT QQALLKSNDI
TDKHRIYAGQ NLLLAQLPSS SEN
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