Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2978 |
Symbol | |
ID | 3707457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3364313 |
End bp | 3369097 |
Gene Length | 4785 bp |
Protein Length | 1594 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637739452 |
Product | NAD-glutamate dehydrogenase |
Protein accession | YP_344950 |
Protein GI | 77166425 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.981083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTT TTGTGGAAGT CCGTGAATCC CGGGCAACCT ATAGCGATCA CGAAAAAAAA ATAAACGAGA TCCATTCATT TTTAGAGCAG CAGAGTAAAA TTCATGGAAA ACGATTTCTT AAAGCGCTTG CCACAATACT TATTACTCCT GACTCTTTTC TTCTTTCTAT TCCCACTTAT CACCTAGCTT CTTTGATAAC AGATTTTTTT GATCTCATTG AGGCACGGGG AAAAAAAATT GCAGCACATT GTTTTCCCTT TCCGGAGAAA ACCGGTACGT TATTGCTGAT AAGCTCGCCC TATGCTTCCT ATCTAGTAGA ATCCCTCGGG GCTTCAAAAG AAGCACAAGA TATCGACTTT CATCTCATGG CCTACCATGC CTTGATGATA AAACGTCGTG ACAGGAAAAT TATTGACTTG GGAACAGCTG ATAAGTCTGG TCCCAAAGAG TCATTGATCC TTCTAAAGCT TGAAGATATT AATGAAAAAA AATTCCAAGA TTTTGCTGCG ACTATTCAAA AAATAGTCTC AAAAACTTTA CAAGTCCAAA GTGATAAGGA AAATATTGCT GCCCAGGTTA GGCAATTAGA GCAGGCGCCG TCCCTTCAAG CATGGAAAAG TTTTTTAATT TGGTGCCAAC AAGGCGCTTT TATTCCATTT TCCTATCATT GCTTTATCGT AAATTCTCAA TCCGGTAAAA AAATTGTTAT TCAAGAACAA AATGATAAAC GTTTGGGATT ACCCTTTGAC TCCCTATTAG AATCAACAAA AGAAGAAAAC GTTTCTTCCT TATTAACTAT TTTGAATCCT GAAGAGATTC AGCGGGAATT ACCAGTTCTT GTTCAGAAAA CTAGGATAAA AAGTCCCCTT TACCATTCCG AATACTTAAC CTATATGGGC ATTAGAGAAC CTCTGGAAAA AGGGCAAATC AAGGAACATG CTTTGATAGG CTTGTTTTCT GAGAAAGCAT TCGCTGGCGA TACCATGAAT ATTTCTGCAT TGCGAGATAA AGCAGAGCAA AGCTTAAAAC AGTTACGTCT GCTTACCGTA GACCACGAAT ACAATAAGCT TATTGAGTTA CTCCATTTTT TCCCTAAAGT AGAGCTCTTT TTTATGGGCG AGGTGCAATT ACAAATTATC GCTCGCTCCT TGCTGCCTTT TCTTTACCGC TCAGACACGG TTAAGCTACT GATCCTTGCA AGCCCTAGCC CTACCCGAAT CTCGACTCTT ATTCTTATTC CCCAAGGATT TTTCGATGAA TCCCATTTAA GAGACATGGA GATTTATCTC TGCCAAGAGC TTGCGGCCAT CCTTGAAAAT TCCCAGCTGA TTCGGGGAAT CCACAGCCAT TATATCGGCT TACACTTGAC TTTAATTCCC CAAAAGGAAG AAGTGCTTAT TCCTCTTGAA CAGCTAGAAA ATACCCTCAC CCGAATTGCT AAACCCTGGA ATTATAAACT TCAAGTGTTG CTAGAACAGG CGATGGGAAA AGAACAAGGG GAGGTTTTAT GGAATAAATA TGGTAAAGGA TTTTTACCAG AATATCAGGT ATTAACTCCG CCCCAAGCAG CTCTCCAAGA TATCAAGGGA TTAGAACGCG TCCTAGAAAC GGGGCAACAA TTCATTGATT TATGGGAATC CCCTTACGAA CTATCCAAGG AACATTATCG TCTTCAGTTT TATAGCTCTC AGGAGAGCTT GCTTGATGAA CTCATGCCGG TGTTAAAAAA TTTGGGTTTA AGAGTAATCG ATCAGGTTCG ATTTACCCTT GAAGTAGAAA ACCGCGGATT TTTTATCAAA AGTTTTTCTA TAAAAGCCGC CAAAGAAACG GCTAAGCCGC TTTCTTCCCT GCGCGTTCCG CTTCTAGACG CCTTAGGCGC TTTGTTCCGC GGCGAAGTAG ACGATGATCC CTTGAATGAA CTGTTGGTAC TGACTGGACT CTCCTGGAAG GAAATCGATA TATTCCGCAG CTATCGGAAT TACTACTTTC AACTTGGCAC ACATTTTACC CTCTCCCGTT TCCACCAATC CCTTAGCCAT AATCCCCAAG TGGCCTTGCT TTTATGCCGC TATTTTGAGG CCCGGTTTCG CCCCGACCCT CAATGGGACG ATCCGGTGCG ACGGGAAGAG GAAGGACTAC TTCCTATCCG TCTGGAACTA GCTACCGCCC TCAAGTCGGT TACAGACGTC AATGAAGATC GTATTCTGCG GACTCTATTT AATCTTATTG ATGCTACCGT ACGCACCAAC TTTTATTACC GGCATAAACA AAGGGATTAC TTTCTTTCTT TCAAGATTAG CAGCTTAGGC GTTATTGATA TGCCCCCTCC TAGGCCCCTG TACGAAATCT ATATCCATTC CGCCACTGTG GAAGGGATTC ATTTGCGCGG TGGACGGGTG GCGCGGGGGG GGCTTCGCTG GTCGGATCGT CCCGATGACT TCCGAACCGA GATCCTCGGG TTGATGCGCA CCCAAATGAT GAAAAATTCA CTCATTGTTC CAGTGGGTGC CAAAGGAGGT TTTATTGTAA AGCGCTCCTT TAGTTCCCGC GAGGAAGGGG CAAAACTAGC TAAACAGGCC TATATTACCT TTATCCAGAG CCTCCTCGAT CTTACCGATA ATCGGGAAGG AAGCCAGGTT GTCCGCCCCC CCAAAGTGGT TGCCTATGAC GAAGATGACC CTTACCTGGT CGTTGCCGCC GATAAAGGCA CGGCTCATCT GCCCGATACC GCCAATGAGG TTGCTCAGGA GTATCATTTC TGGCTGGATA GTGCCTTCGC CAGTGGGGGC GCCTTTGGAT ACCATCATAA GAAGTTGGGA ATCACAGCTC GTGGCGCCTG GGAGTGCGTA AAGCGGCATT TTCGTGAGCT AGATCTTGAT ATTCAAACCC AACCCTTTAC CGCTATAGGC ATTGGTAGCA TGGACGGGGA TGTTTTTGGC AATGGCATGC TACTCTCCCG CCAGATACGC TTACTAGCCG CCTTTGGACC CGGGCATATT TTTATTGATC CCGAGCCAGA CCCGGAAGTT TCCTATAGAG AACGGAAAAG ATTATTTAAG CTACCCGGTT CCTCCTGGAA CGACTATGAC GACACCTTGA TTTCCGAGGG AGGAGGCATT TTCCCTCGCC GGGCTAAGGA TATTCCTCTT TCCCCCCAAG TGCGCTACTT GCTAAAGACG CGGCACCTAT CCATGGATGG TGAAGGACTG ATTCGCTTAC TCCTGACAAC CCCGGTTGAT CTGCTCTGGT TTGGAGGTAT CGGCACCTAT GTCAAAGCGA GTACAGAAAA ACACATCGAG GTGGGTGACC GCACCAATGA CACGGTCCGA GTCGATGCTT CACAACTACA AGCGCGGGTA GTAGGCGAAG GTGCCAACTT GGGTTTTACT CAAAGGGGAC GCATCGAATA CGCCTTAGGA GGCGGTCGTA TCAATACGGA TGCCATTGAT AATTCCGGCG GCGTGGATCT TTCCGACCAT GAGGTTAATC TCAAGATCTT TTTTAATCAC TTGAGAGAAA GAAAAATCAT CTCTTCTGAG GAAGAACAAA ATCACTGGCT CGAGAAGGTC AAGGAAGAAG TATGCCAGCA GGTGCTAGCC AACAATTATA GTCAAAGTCT ATGCTTATCC CTTGATCGGG AGCGCTACCT GCGGGACACC GAGCCTTTTA TGGAGCTAGC GGATCGCTTA GAAAATTCTG GCTTACTTGA TCGTCTTTCC GATACATTTC CCTATCGCAA GGAAGTCTTG GCGAGGCATG GGGAGGGTTT GACCCGTCCC GAGCTGGCTG TTCTGGTATC CTATAGCAAG ACGCAACTTT ACCAAATTCT TTTAGAGCAA CCAGATATTT TGTCCGAGCC GTTTCTGCAA GAGTTTGCTA TTAGCTATTT TCCCCGGGCC ATAAACGAGC AGTTCGGTAA CCATATATAC GATCATCCTC TAGGGAAGGA AATTACGGCG ACTATTTTAT GTAACACCAT TATTGACCAC ACAGGGTGCT CTTTTCTTAC CTGGGTAGAA GAATTAAAAG ATATTCCTAT TGCCCATCAC CCTATGGTAG CTTATTTAGT ATTCAATAAA ATCCTAGAAG GAAATACCCT ACGTACCCAA ATTTATGCTT TAGATACCAT CATTCCTGCT TCTCGTCAGT ATAGTTTATT ATTACAGTTT GAAGATACAC TAGCAAATTT CTGCCACTGG AATCTGGCTA ATAATAAACA AATTATTCCC AACGAAAAAA CGCTATCTTC GTTCCATTAT TATTTAGAGC AATATGAACT ATACCAAGAA GAAACTTTGA CTAAATCCGA AGATCAACCT TTTAAAGAAA GGGTAAGGAA GCTTATAGAG GAAGGTTTTT CAGCAAAAAT TTCCCGCCGT ATCGCTCTCT TAGATCGTCT CACAGACTTT CCTCTATTAG TAGAGCTTGC CAGTACTTCA GGAAAAGAGT TTTCTCTCGT AGTAAGTATT TACGAAGCGG TCTCCAATTA TCTGGGCTAT TCCGAGGTAA AAGAGATTTT ACACCAGGTA CCCGTGCGTA ATCGTTGGGA ACATAGAGCG ATAACCACAT TCAGAGAACG GTTCGAAGTT TATCTATCAA ACTTAGCTTT AGCCATACTA GCTGCCCCAG ATCAGGGCAT TGCTAATTTT TTCTCCACGA CAACGCGTCA ACAGAGATTA TTACAGTACC AAAGAATACG GGAAGAATTA AGGGAAACCC CTCCTACCGA TTTGCTTCCC TTCACGGTGC TGAGCAGAAA GTTAGAAACC TTAATTCAAG GTTAA
|
Protein sequence | MKIFVEVRES RATYSDHEKK INEIHSFLEQ QSKIHGKRFL KALATILITP DSFLLSIPTY HLASLITDFF DLIEARGKKI AAHCFPFPEK TGTLLLISSP YASYLVESLG ASKEAQDIDF HLMAYHALMI KRRDRKIIDL GTADKSGPKE SLILLKLEDI NEKKFQDFAA TIQKIVSKTL QVQSDKENIA AQVRQLEQAP SLQAWKSFLI WCQQGAFIPF SYHCFIVNSQ SGKKIVIQEQ NDKRLGLPFD SLLESTKEEN VSSLLTILNP EEIQRELPVL VQKTRIKSPL YHSEYLTYMG IREPLEKGQI KEHALIGLFS EKAFAGDTMN ISALRDKAEQ SLKQLRLLTV DHEYNKLIEL LHFFPKVELF FMGEVQLQII ARSLLPFLYR SDTVKLLILA SPSPTRISTL ILIPQGFFDE SHLRDMEIYL CQELAAILEN SQLIRGIHSH YIGLHLTLIP QKEEVLIPLE QLENTLTRIA KPWNYKLQVL LEQAMGKEQG EVLWNKYGKG FLPEYQVLTP PQAALQDIKG LERVLETGQQ FIDLWESPYE LSKEHYRLQF YSSQESLLDE LMPVLKNLGL RVIDQVRFTL EVENRGFFIK SFSIKAAKET AKPLSSLRVP LLDALGALFR GEVDDDPLNE LLVLTGLSWK EIDIFRSYRN YYFQLGTHFT LSRFHQSLSH NPQVALLLCR YFEARFRPDP QWDDPVRREE EGLLPIRLEL ATALKSVTDV NEDRILRTLF NLIDATVRTN FYYRHKQRDY FLSFKISSLG VIDMPPPRPL YEIYIHSATV EGIHLRGGRV ARGGLRWSDR PDDFRTEILG LMRTQMMKNS LIVPVGAKGG FIVKRSFSSR EEGAKLAKQA YITFIQSLLD LTDNREGSQV VRPPKVVAYD EDDPYLVVAA DKGTAHLPDT ANEVAQEYHF WLDSAFASGG AFGYHHKKLG ITARGAWECV KRHFRELDLD IQTQPFTAIG IGSMDGDVFG NGMLLSRQIR LLAAFGPGHI FIDPEPDPEV SYRERKRLFK LPGSSWNDYD DTLISEGGGI FPRRAKDIPL SPQVRYLLKT RHLSMDGEGL IRLLLTTPVD LLWFGGIGTY VKASTEKHIE VGDRTNDTVR VDASQLQARV VGEGANLGFT QRGRIEYALG GGRINTDAID NSGGVDLSDH EVNLKIFFNH LRERKIISSE EEQNHWLEKV KEEVCQQVLA NNYSQSLCLS LDRERYLRDT EPFMELADRL ENSGLLDRLS DTFPYRKEVL ARHGEGLTRP ELAVLVSYSK TQLYQILLEQ PDILSEPFLQ EFAISYFPRA INEQFGNHIY DHPLGKEITA TILCNTIIDH TGCSFLTWVE ELKDIPIAHH PMVAYLVFNK ILEGNTLRTQ IYALDTIIPA SRQYSLLLQF EDTLANFCHW NLANNKQIIP NEKTLSSFHY YLEQYELYQE ETLTKSEDQP FKERVRKLIE EGFSAKISRR IALLDRLTDF PLLVELASTS GKEFSLVVSI YEAVSNYLGY SEVKEILHQV PVRNRWEHRA ITTFRERFEV YLSNLALAIL AAPDQGIANF FSTTTRQQRL LQYQRIREEL RETPPTDLLP FTVLSRKLET LIQG
|
| |