Gene Noc_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2978 
Symbol 
ID3707457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3364313 
End bp3369097 
Gene Length4785 bp 
Protein Length1594 aa 
Translation table11 
GC content44% 
IMG OID637739452 
ProductNAD-glutamate dehydrogenase 
Protein accessionYP_344950 
Protein GI77166425 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2902] NAD-specific glutamate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.981083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TTGTGGAAGT CCGTGAATCC CGGGCAACCT ATAGCGATCA CGAAAAAAAA 
ATAAACGAGA TCCATTCATT TTTAGAGCAG CAGAGTAAAA TTCATGGAAA ACGATTTCTT
AAAGCGCTTG CCACAATACT TATTACTCCT GACTCTTTTC TTCTTTCTAT TCCCACTTAT
CACCTAGCTT CTTTGATAAC AGATTTTTTT GATCTCATTG AGGCACGGGG AAAAAAAATT
GCAGCACATT GTTTTCCCTT TCCGGAGAAA ACCGGTACGT TATTGCTGAT AAGCTCGCCC
TATGCTTCCT ATCTAGTAGA ATCCCTCGGG GCTTCAAAAG AAGCACAAGA TATCGACTTT
CATCTCATGG CCTACCATGC CTTGATGATA AAACGTCGTG ACAGGAAAAT TATTGACTTG
GGAACAGCTG ATAAGTCTGG TCCCAAAGAG TCATTGATCC TTCTAAAGCT TGAAGATATT
AATGAAAAAA AATTCCAAGA TTTTGCTGCG ACTATTCAAA AAATAGTCTC AAAAACTTTA
CAAGTCCAAA GTGATAAGGA AAATATTGCT GCCCAGGTTA GGCAATTAGA GCAGGCGCCG
TCCCTTCAAG CATGGAAAAG TTTTTTAATT TGGTGCCAAC AAGGCGCTTT TATTCCATTT
TCCTATCATT GCTTTATCGT AAATTCTCAA TCCGGTAAAA AAATTGTTAT TCAAGAACAA
AATGATAAAC GTTTGGGATT ACCCTTTGAC TCCCTATTAG AATCAACAAA AGAAGAAAAC
GTTTCTTCCT TATTAACTAT TTTGAATCCT GAAGAGATTC AGCGGGAATT ACCAGTTCTT
GTTCAGAAAA CTAGGATAAA AAGTCCCCTT TACCATTCCG AATACTTAAC CTATATGGGC
ATTAGAGAAC CTCTGGAAAA AGGGCAAATC AAGGAACATG CTTTGATAGG CTTGTTTTCT
GAGAAAGCAT TCGCTGGCGA TACCATGAAT ATTTCTGCAT TGCGAGATAA AGCAGAGCAA
AGCTTAAAAC AGTTACGTCT GCTTACCGTA GACCACGAAT ACAATAAGCT TATTGAGTTA
CTCCATTTTT TCCCTAAAGT AGAGCTCTTT TTTATGGGCG AGGTGCAATT ACAAATTATC
GCTCGCTCCT TGCTGCCTTT TCTTTACCGC TCAGACACGG TTAAGCTACT GATCCTTGCA
AGCCCTAGCC CTACCCGAAT CTCGACTCTT ATTCTTATTC CCCAAGGATT TTTCGATGAA
TCCCATTTAA GAGACATGGA GATTTATCTC TGCCAAGAGC TTGCGGCCAT CCTTGAAAAT
TCCCAGCTGA TTCGGGGAAT CCACAGCCAT TATATCGGCT TACACTTGAC TTTAATTCCC
CAAAAGGAAG AAGTGCTTAT TCCTCTTGAA CAGCTAGAAA ATACCCTCAC CCGAATTGCT
AAACCCTGGA ATTATAAACT TCAAGTGTTG CTAGAACAGG CGATGGGAAA AGAACAAGGG
GAGGTTTTAT GGAATAAATA TGGTAAAGGA TTTTTACCAG AATATCAGGT ATTAACTCCG
CCCCAAGCAG CTCTCCAAGA TATCAAGGGA TTAGAACGCG TCCTAGAAAC GGGGCAACAA
TTCATTGATT TATGGGAATC CCCTTACGAA CTATCCAAGG AACATTATCG TCTTCAGTTT
TATAGCTCTC AGGAGAGCTT GCTTGATGAA CTCATGCCGG TGTTAAAAAA TTTGGGTTTA
AGAGTAATCG ATCAGGTTCG ATTTACCCTT GAAGTAGAAA ACCGCGGATT TTTTATCAAA
AGTTTTTCTA TAAAAGCCGC CAAAGAAACG GCTAAGCCGC TTTCTTCCCT GCGCGTTCCG
CTTCTAGACG CCTTAGGCGC TTTGTTCCGC GGCGAAGTAG ACGATGATCC CTTGAATGAA
CTGTTGGTAC TGACTGGACT CTCCTGGAAG GAAATCGATA TATTCCGCAG CTATCGGAAT
TACTACTTTC AACTTGGCAC ACATTTTACC CTCTCCCGTT TCCACCAATC CCTTAGCCAT
AATCCCCAAG TGGCCTTGCT TTTATGCCGC TATTTTGAGG CCCGGTTTCG CCCCGACCCT
CAATGGGACG ATCCGGTGCG ACGGGAAGAG GAAGGACTAC TTCCTATCCG TCTGGAACTA
GCTACCGCCC TCAAGTCGGT TACAGACGTC AATGAAGATC GTATTCTGCG GACTCTATTT
AATCTTATTG ATGCTACCGT ACGCACCAAC TTTTATTACC GGCATAAACA AAGGGATTAC
TTTCTTTCTT TCAAGATTAG CAGCTTAGGC GTTATTGATA TGCCCCCTCC TAGGCCCCTG
TACGAAATCT ATATCCATTC CGCCACTGTG GAAGGGATTC ATTTGCGCGG TGGACGGGTG
GCGCGGGGGG GGCTTCGCTG GTCGGATCGT CCCGATGACT TCCGAACCGA GATCCTCGGG
TTGATGCGCA CCCAAATGAT GAAAAATTCA CTCATTGTTC CAGTGGGTGC CAAAGGAGGT
TTTATTGTAA AGCGCTCCTT TAGTTCCCGC GAGGAAGGGG CAAAACTAGC TAAACAGGCC
TATATTACCT TTATCCAGAG CCTCCTCGAT CTTACCGATA ATCGGGAAGG AAGCCAGGTT
GTCCGCCCCC CCAAAGTGGT TGCCTATGAC GAAGATGACC CTTACCTGGT CGTTGCCGCC
GATAAAGGCA CGGCTCATCT GCCCGATACC GCCAATGAGG TTGCTCAGGA GTATCATTTC
TGGCTGGATA GTGCCTTCGC CAGTGGGGGC GCCTTTGGAT ACCATCATAA GAAGTTGGGA
ATCACAGCTC GTGGCGCCTG GGAGTGCGTA AAGCGGCATT TTCGTGAGCT AGATCTTGAT
ATTCAAACCC AACCCTTTAC CGCTATAGGC ATTGGTAGCA TGGACGGGGA TGTTTTTGGC
AATGGCATGC TACTCTCCCG CCAGATACGC TTACTAGCCG CCTTTGGACC CGGGCATATT
TTTATTGATC CCGAGCCAGA CCCGGAAGTT TCCTATAGAG AACGGAAAAG ATTATTTAAG
CTACCCGGTT CCTCCTGGAA CGACTATGAC GACACCTTGA TTTCCGAGGG AGGAGGCATT
TTCCCTCGCC GGGCTAAGGA TATTCCTCTT TCCCCCCAAG TGCGCTACTT GCTAAAGACG
CGGCACCTAT CCATGGATGG TGAAGGACTG ATTCGCTTAC TCCTGACAAC CCCGGTTGAT
CTGCTCTGGT TTGGAGGTAT CGGCACCTAT GTCAAAGCGA GTACAGAAAA ACACATCGAG
GTGGGTGACC GCACCAATGA CACGGTCCGA GTCGATGCTT CACAACTACA AGCGCGGGTA
GTAGGCGAAG GTGCCAACTT GGGTTTTACT CAAAGGGGAC GCATCGAATA CGCCTTAGGA
GGCGGTCGTA TCAATACGGA TGCCATTGAT AATTCCGGCG GCGTGGATCT TTCCGACCAT
GAGGTTAATC TCAAGATCTT TTTTAATCAC TTGAGAGAAA GAAAAATCAT CTCTTCTGAG
GAAGAACAAA ATCACTGGCT CGAGAAGGTC AAGGAAGAAG TATGCCAGCA GGTGCTAGCC
AACAATTATA GTCAAAGTCT ATGCTTATCC CTTGATCGGG AGCGCTACCT GCGGGACACC
GAGCCTTTTA TGGAGCTAGC GGATCGCTTA GAAAATTCTG GCTTACTTGA TCGTCTTTCC
GATACATTTC CCTATCGCAA GGAAGTCTTG GCGAGGCATG GGGAGGGTTT GACCCGTCCC
GAGCTGGCTG TTCTGGTATC CTATAGCAAG ACGCAACTTT ACCAAATTCT TTTAGAGCAA
CCAGATATTT TGTCCGAGCC GTTTCTGCAA GAGTTTGCTA TTAGCTATTT TCCCCGGGCC
ATAAACGAGC AGTTCGGTAA CCATATATAC GATCATCCTC TAGGGAAGGA AATTACGGCG
ACTATTTTAT GTAACACCAT TATTGACCAC ACAGGGTGCT CTTTTCTTAC CTGGGTAGAA
GAATTAAAAG ATATTCCTAT TGCCCATCAC CCTATGGTAG CTTATTTAGT ATTCAATAAA
ATCCTAGAAG GAAATACCCT ACGTACCCAA ATTTATGCTT TAGATACCAT CATTCCTGCT
TCTCGTCAGT ATAGTTTATT ATTACAGTTT GAAGATACAC TAGCAAATTT CTGCCACTGG
AATCTGGCTA ATAATAAACA AATTATTCCC AACGAAAAAA CGCTATCTTC GTTCCATTAT
TATTTAGAGC AATATGAACT ATACCAAGAA GAAACTTTGA CTAAATCCGA AGATCAACCT
TTTAAAGAAA GGGTAAGGAA GCTTATAGAG GAAGGTTTTT CAGCAAAAAT TTCCCGCCGT
ATCGCTCTCT TAGATCGTCT CACAGACTTT CCTCTATTAG TAGAGCTTGC CAGTACTTCA
GGAAAAGAGT TTTCTCTCGT AGTAAGTATT TACGAAGCGG TCTCCAATTA TCTGGGCTAT
TCCGAGGTAA AAGAGATTTT ACACCAGGTA CCCGTGCGTA ATCGTTGGGA ACATAGAGCG
ATAACCACAT TCAGAGAACG GTTCGAAGTT TATCTATCAA ACTTAGCTTT AGCCATACTA
GCTGCCCCAG ATCAGGGCAT TGCTAATTTT TTCTCCACGA CAACGCGTCA ACAGAGATTA
TTACAGTACC AAAGAATACG GGAAGAATTA AGGGAAACCC CTCCTACCGA TTTGCTTCCC
TTCACGGTGC TGAGCAGAAA GTTAGAAACC TTAATTCAAG GTTAA
 
Protein sequence
MKIFVEVRES RATYSDHEKK INEIHSFLEQ QSKIHGKRFL KALATILITP DSFLLSIPTY 
HLASLITDFF DLIEARGKKI AAHCFPFPEK TGTLLLISSP YASYLVESLG ASKEAQDIDF
HLMAYHALMI KRRDRKIIDL GTADKSGPKE SLILLKLEDI NEKKFQDFAA TIQKIVSKTL
QVQSDKENIA AQVRQLEQAP SLQAWKSFLI WCQQGAFIPF SYHCFIVNSQ SGKKIVIQEQ
NDKRLGLPFD SLLESTKEEN VSSLLTILNP EEIQRELPVL VQKTRIKSPL YHSEYLTYMG
IREPLEKGQI KEHALIGLFS EKAFAGDTMN ISALRDKAEQ SLKQLRLLTV DHEYNKLIEL
LHFFPKVELF FMGEVQLQII ARSLLPFLYR SDTVKLLILA SPSPTRISTL ILIPQGFFDE
SHLRDMEIYL CQELAAILEN SQLIRGIHSH YIGLHLTLIP QKEEVLIPLE QLENTLTRIA
KPWNYKLQVL LEQAMGKEQG EVLWNKYGKG FLPEYQVLTP PQAALQDIKG LERVLETGQQ
FIDLWESPYE LSKEHYRLQF YSSQESLLDE LMPVLKNLGL RVIDQVRFTL EVENRGFFIK
SFSIKAAKET AKPLSSLRVP LLDALGALFR GEVDDDPLNE LLVLTGLSWK EIDIFRSYRN
YYFQLGTHFT LSRFHQSLSH NPQVALLLCR YFEARFRPDP QWDDPVRREE EGLLPIRLEL
ATALKSVTDV NEDRILRTLF NLIDATVRTN FYYRHKQRDY FLSFKISSLG VIDMPPPRPL
YEIYIHSATV EGIHLRGGRV ARGGLRWSDR PDDFRTEILG LMRTQMMKNS LIVPVGAKGG
FIVKRSFSSR EEGAKLAKQA YITFIQSLLD LTDNREGSQV VRPPKVVAYD EDDPYLVVAA
DKGTAHLPDT ANEVAQEYHF WLDSAFASGG AFGYHHKKLG ITARGAWECV KRHFRELDLD
IQTQPFTAIG IGSMDGDVFG NGMLLSRQIR LLAAFGPGHI FIDPEPDPEV SYRERKRLFK
LPGSSWNDYD DTLISEGGGI FPRRAKDIPL SPQVRYLLKT RHLSMDGEGL IRLLLTTPVD
LLWFGGIGTY VKASTEKHIE VGDRTNDTVR VDASQLQARV VGEGANLGFT QRGRIEYALG
GGRINTDAID NSGGVDLSDH EVNLKIFFNH LRERKIISSE EEQNHWLEKV KEEVCQQVLA
NNYSQSLCLS LDRERYLRDT EPFMELADRL ENSGLLDRLS DTFPYRKEVL ARHGEGLTRP
ELAVLVSYSK TQLYQILLEQ PDILSEPFLQ EFAISYFPRA INEQFGNHIY DHPLGKEITA
TILCNTIIDH TGCSFLTWVE ELKDIPIAHH PMVAYLVFNK ILEGNTLRTQ IYALDTIIPA
SRQYSLLLQF EDTLANFCHW NLANNKQIIP NEKTLSSFHY YLEQYELYQE ETLTKSEDQP
FKERVRKLIE EGFSAKISRR IALLDRLTDF PLLVELASTS GKEFSLVVSI YEAVSNYLGY
SEVKEILHQV PVRNRWEHRA ITTFRERFEV YLSNLALAIL AAPDQGIANF FSTTTRQQRL
LQYQRIREEL RETPPTDLLP FTVLSRKLET LIQG