Gene Noc_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2944 
Symbol 
ID3706426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3332276 
End bp3332743 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content47% 
IMG OID637739421 
Producttranscription regulator 
Protein accessionYP_344919 
Protein GI77166394 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACTA CCGAATATCG GAAAGTGGCT GATAGTTTTT CTCATTTTTC CCAAGCAGCC 
CATCGCTTTA TCCATATCCG CAACAAGCGT GACTATCAGA AAACCTTGGA TCTGATTGAA
GAACTCATGA CCGAAGCGGA AGATTCTAGA TTAGATCCGT TGAATGACCT CATCAAGATA
CTGGCTGGCG CTGTTGAGGA GTATGAATCA AAACAGGACA AGATGGTTCA GTTCCACAAG
GAGGCTGAAG GTATTGATCC TGGTGTTTCA GCATTAAGAT TGCTTATGGA GCAGCATGCG
CTGGGAGCAT CTGGGCTGCG TGAAGAAATA GGCTCTAAGT CTTTGGTGTC TATGATTTTG
TCTGGGCAGC GGTCGCTTAC TAAAGAGCAT ATTGCCAAGC TATCAGGCCG TTTCGGCGTA
AGCCCGGCGG TGTTTTTTGG GGCGGACCTA ACAAATCGCT GCAGATGA
 
Protein sequence
MLTTEYRKVA DSFSHFSQAA HRFIHIRNKR DYQKTLDLIE ELMTEAEDSR LDPLNDLIKI 
LAGAVEEYES KQDKMVQFHK EAEGIDPGVS ALRLLMEQHA LGASGLREEI GSKSLVSMIL
SGQRSLTKEH IAKLSGRFGV SPAVFFGADL TNRCR