| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2938 |
|---|
| Symbol | |
|---|
| ID | 3706420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3326815 |
|---|
| End bp | 3327924 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637739415 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_344913 |
|---|
| Protein GI | 77166388 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGCA ATACTCTTGG CAAACTTTTT ACTGTTACCA CCTTTGGCGA AAGCCACGGG
CCGGCGTTGG GCTGTATTGT AGATGGCTGC CCCCCGGGCT TGGCTTTATG CGAGACGGAT
ATTCAAATTG ACCTGGATCG GCGCCGGCCC GGTAAATCCC GTCATACTAC CCAGCGCCGG
GAACCGGATC AGGTCCAGAT CCTCTCCGGG GTGTTCGAGG GAAAAACCAC CGGCACTCCC
ATCGGTTTGT TAATTGAAAA TGTCGATCAA CGCTCCCGGG ATTACGATAA AATCAAGGAG
CAAATCCGGC CCGGCCATGC AGACTATACT TATTTGCAAA AATATGGCCT GCGGGATTAC
CGGGGAGGGG GGCGTTCCTC GGCCCGGGAG ACGGCCATGC GGGTAGCTGC GGGCGCTATC
GCCAAGAAAT ACCTGGCAGA GCGGCATGGC GTAAAAATTC GGGGGTATCT GGCTCAGCTT
GGCCCCATTC GGGCTGAACG ATTCGACTGG GAAATCGTGG AGAAAAATCC CTTTTTCTGC
CCGGACCCGG ATAAAATATC TGAACTTGAA GCCTATATGG ACGCTCTCCG GAAAGAAGGC
GATTCCATTG GCGCCCGGAT TAACGTGGTG GCTACCGGAG TCCCTCCCGG TCTGGGCGAG
CCGGTCTTTG ATCGCCTCGA TGCGGATTTG GCCCATGCCC TTATGAGCAT TAACGCCGTT
AAGGGCGTGG AAATCGGTGT TGGTTTCGCC GCAGTGACCC AAAAGGGTAC TGACCATCGC
GACCCCCTTA CCCCGGAAGG TTTCCTCAGT AACCATGCGG GCGGTGTCTT GGGGGGGATT
TCCACGGGGC AGGATATTCT TGCTAGCATT GCGCTAAAAC CCACTTCCAG CCTCCGCTTA
CCCGAGCGTA CCATTAACTG CCGGGGCGAG TCTGCGGAAG TCGTTACCAC GGGCCGCCAT
GATCCTTGTG TTGGCATTCG GGCAACGCCT ATTGCCGAAG CCATGGCTGC CTTGGTGTTG
ATGGACCATC TGCTGCGCCA CCGCGCCCAA AATATGGACG TTCAGCCGAG TTTGCCATCC
ATCCCCGCTT ATCCCGGTGG TGGCGGCTAA
|
|---|
| Protein sequence | MSGNTLGKLF TVTTFGESHG PALGCIVDGC PPGLALCETD IQIDLDRRRP GKSRHTTQRR
EPDQVQILSG VFEGKTTGTP IGLLIENVDQ RSRDYDKIKE QIRPGHADYT YLQKYGLRDY
RGGGRSSARE TAMRVAAGAI AKKYLAERHG VKIRGYLAQL GPIRAERFDW EIVEKNPFFC
PDPDKISELE AYMDALRKEG DSIGARINVV ATGVPPGLGE PVFDRLDADL AHALMSINAV
KGVEIGVGFA AVTQKGTDHR DPLTPEGFLS NHAGGVLGGI STGQDILASI ALKPTSSLRL
PERTINCRGE SAEVVTTGRH DPCVGIRATP IAEAMAALVL MDHLLRHRAQ NMDVQPSLPS
IPAYPGGGG
|
|---|
| |