| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2937 |
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| Symbol | |
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| ID | 3705366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3325081 |
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| End bp | 3326337 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637739414 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_344912 |
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| Protein GI | 77166387 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCCA GAGGTAAGGT TGTAAAAATA GTATCCCCCT TCATTATTCT GTTTGTTTCC
GTGGCCATCT TTGTGGGCTT GTTTCAAAGC AGGCCGACCA AGCCTGAGGT GAGCAAGAAA
GAAACCGTAT GGCGGGTGGC GGTCACGCCA GTCGATCCCC GTCCAAGACG GCCCATACTT
CCCCTTTATG GCCGTATCGA AACCCCCCGT TCAAGCAAGC TTCGGGCCGC CATCACGGCG
GATGTTCAGG AAGTCAAGGT AGAAGAGGGG GAGCTCGTGG GCCGTGGTCA ATTGCTGGTC
CAGCTCGATG AGCAGGAAGT TAAGCTGGAG TGGCTACAGC GTCAGGCGGA TTTAAAAGAG
ATTGAAGCGT TTATTGCGAG CGAGAAAGTT CGGCATGCCC ATGATTTGAA GGCGCTAAAG
CATGAGAAAT CCTTATTGGC CTTGAGTCGC CGGGCGGTGG AGCGGGCCGA AACCCTAGAG
CAGCGCAAGC TCACTCCCCG CTCAGTCTTG GATGAAGCAC GGCAGGCCGC CGGGCGGCAA
GCCTTGGAGC TCAATAACCG CCTACTTGCG ATTGATGATC ACCAGGCCCG TTTGGCGCAA
CTCAAAGCCC GACAACTTCG AGCCCAGGCG CTGTTGGATC AGGCCAAGCT GGATCTGGAA
CGGACTCGAA TTACATCTCC TTATACGGGC CGGATTGCAT CAGTTGCTAT TGCCACGGGG
GATCGGGTAC AGGCCGGTGA TGAATTGCTT CAGATTTATG ATACCGATGC TTTAGAGGTC
CGGGCGCAAA TTCCTTCCAG CTATGCCGGT CAAATTCGTA AGGCATTAGC GCAAAATGTA
TCGCTACGGG CCGCTGCCAA GGTGGATGGA AGCGGTTTTC TCTTTTCCCT TGATCGGCTG
GCGGGGCGGG TGGAGAAAGG CAGCGGCGGC GTTGATGCGT TGCTTAAACT AGAGAAGCCA
GAACATGCTG CCTTGCCCCT TGGTAATTTT GTCGAGTTGC GATTACAACT ACCGCTGGCG
GAAGACGTAG TAATGCTGCC CTTTGAGGCC ATCTACGGTC TGGATCGGGT TTATAAGCTG
GTGGGGGGAC GGATGCAGGC CGTTGCAGTG GAGCGAATTG GCGAGTATCC GGATAAGGAG
GGACAAATTC AGGTGCTCGT GAAAAGCCCC CAACTGCAAG AAAACGATCA AGTTATCACC
ACCCAGCTTC CCAATGCCAT GGAAGGGTTG CGGGTAGAGG TCGTCGCAGA CTCGTGA
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| Protein sequence | MPARGKVVKI VSPFIILFVS VAIFVGLFQS RPTKPEVSKK ETVWRVAVTP VDPRPRRPIL
PLYGRIETPR SSKLRAAITA DVQEVKVEEG ELVGRGQLLV QLDEQEVKLE WLQRQADLKE
IEAFIASEKV RHAHDLKALK HEKSLLALSR RAVERAETLE QRKLTPRSVL DEARQAAGRQ
ALELNNRLLA IDDHQARLAQ LKARQLRAQA LLDQAKLDLE RTRITSPYTG RIASVAIATG
DRVQAGDELL QIYDTDALEV RAQIPSSYAG QIRKALAQNV SLRAAAKVDG SGFLFSLDRL
AGRVEKGSGG VDALLKLEKP EHAALPLGNF VELRLQLPLA EDVVMLPFEA IYGLDRVYKL
VGGRMQAVAV ERIGEYPDKE GQIQVLVKSP QLQENDQVIT TQLPNAMEGL RVEVVADS
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