| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2936 |
|---|
| Symbol | |
|---|
| ID | 3705365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3321893 |
|---|
| End bp | 3325054 |
|---|
| Gene Length | 3162 bp |
|---|
| Protein Length | 1053 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637739413 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_344911 |
|---|
| Protein GI | 77166386 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTGT TTGTCCGGCA TCGGGTGGCG GCCAACCTGT TGATGGTGAT CATGATCCTT
TCTGGAACCT GGGCGCTTTC TCAGCTTAAT CGGCAGTTTT TTCCCAATTT TGCCCTGGAT
ATCATCACCG TGAGTGTGGT TTGGCGCGGT GCAAGCGCCG AAGACGTTTC CCGCTCTATC
ACCGAGCGCC TTGAGGAAGA GCTTCGAGCT TTGGATGACC TTAAAAAACT CGATTCAACT
TCAGCTTACG GCTTAGCTAC CCTGACCTTG GAATATTATG AAGGCACCGA TATGGGGATT
GCCCTGGATA AGGTCAAAGA GCGAATAGGC CAAATCCGGG AGTTGCCCCT TGATTCGGAG
ACCCCCGAGA TCCGCTTGGT GTCGCGCTAT GAAAATATCG CCCGGGTGCT GGTCACGGGT
CCTGAAGATC CCCAGGAACT GCGGCGATTG GTGCATAAGT TTGAGAGGGA CTTGCTTAAT
CGGGGAATTG CTAAGGTGGA TATTGCTGGA CTTCCCCAGC AAGAGATCGC TATCCAGATA
CCGGTAGGGA ACCTGCGGGA GCTGGAAATG TCCTTGGGGC AAGTGGCTAA TCGGGTGGCG
GATATCAGCC GGGATCTGCC GGCGGGCACC ATTGGTCGCG ATGATGTGGC CCGTCAGCTA
CGTAGCCTAG ACCAGCGGCG GGATAGCCGG GCGTTTGCCG ATATACCGCT AACAGCGCAG
AGTGATGGCC GTCTGATTCG TTTGGGTGAT GTGGCCACGA TTGAGCGCCG GGATCGGGAT
GGAGAGACCC GGTTGTTTTA TCAAGGAAAA CCAGCGGTGG AGCTGCAACT AAAGCGCACT
GAATCCGGAG ACTCGCTCCA AGGCGCCGAG ATTTTAATCC AATGGTTGCA AGCCGTGCGT
CCCACTTTAC CAGAAGGCAT TAAGCTACAC CTCTTCGATC AATCCTGGGA ATTGGTGAAG
GAACGTATCG GGTTGCTGCT CAAAAATGGC GGCGGCGGTT TAGTCTTGGT AGTCGGTATC
CTTTTTCTAT TTCTCAGCGG CCGGGTCGCC ATTTGGGTAG CCATCGGGAT TCCCGTCTCT
TTCCTGGCGA CCCTGGCAGT TCTCTGGGTT GCGGGTGGCA GCATCAACAT GATCAGCTTG
TTCGCCTTGA TCATGGCCCT TGGAATCATC GTTGATGATG CCATCGTGGT GGGTGAAGAT
GCCCTCGCCC AGCATCAGCA GGGGCTATCC CCATTGGCGG CGGCCGAGGG CGGTGCCCGC
CATATGCTCC TGCCGGTTCT CGCCTCATCC TTAACCACCG TTGCCGCTTT TCTCCCCTTG
ATGCTCATAG GCGATGTGAC CGGTAACATT CTATTCGATA TCCCCCTGGT GGTGATCTGC
GTCATTCTGG CCTCTTTGGT TGAAAGTTTT CTCGTGTTGC CTGGCCACCT GCGGTATAGC
TTCGAGAAAA TGAAAATTGG CCGGGAAGGC AAGGTTCGTT TGCGGCTGAA TCAGGTTTTT
GACCGTTTCC GGAAGCGGAT TTTCCGGCCC CTGGCTCTGT TTGCGATTCA GAACCGGTGG
ATTACCGTGA GCGCGGCCTT GGGGCTGTTG CTGGTAGTTT TGGGTCTGTT GCTTGGGGGG
CGCATCAGTT TTACTTTCTT TCCCTCTCCC GAAGGTAAAG TCGTTTATGC TAATACCAGT
TTTGCGCCCG GCACCCCGCC TCAAAGAGTT GCGGCTTTTA TTATGGAGCT GGAACGGACG
CTCTATGATA CGGAGGCGGC TTTCGGGCAA GACTTGATTG TGGCTTCCAT TGTAAAGCTG
GGTTCAGCGA CCACCGCCGG GGGCCGGGCC GCCCGTAATG GGGATCGCTT TGGCTCCATT
ACCGTGGAGC TCGTTTCCCC CGACCGGCGC GAAGTGCGGA ATCAAGCTTT TATCCAAGCC
TGGCAAGAGC GGATCAAACT GCCGCCCGGT ATTGAGAGTT TTACGCTGTC CGAACGGCAG
ACGGGACCAC CCGGCCAAGA TTTAGATATT GTCTTACTAG GGGAAGATGA ACGGGCCTTG
AAAGGGGCGG CGGTAGAATT GGCGGAGGCC TTAAGCAAGA TCCCCGGCGT CTCCGCGGTG
GAAGATGATC TGCCTTACGG CCAAGAGCAA CTCATTTACC GTTTGACTCC AGAAGGCCAG
TCCCTGGAAC TTACGGTAGA GGCCGTGGGC AGGCAACTCC GGGCGGCCTA TGAAGGCCGG
CTGGTGCAGA TATTTCAGGA CGGGGGAGAT GAAATTGAGG TGCGGGTGCT CCTGCCCGAC
AATGAACGCT ATCGTCTGGC CAGTCTCACC CACCTGGCTA TCCAGCTTCC CAATGGCGGT
ATCGCGCCCT TGGATACGGT AGTCGATTTA GAGTCCCGGC GGGGATTTGA TGTCCTGCGT
CATACCCAGG GTAAGCTGGC AGTTCATGTC TCCGGGAATG TGGATCGGAA AGTCAACAAC
AGCAACCGCA TTCTCGCTGG ACTAGAACAT AGTTTTTTGC CGGAGCTCCG CACCCGCTAT
GGAATTCAAA CCCTGTTTGA GGGCCGGGCC GAGGAACAGC GGGATACCCT CGGCGATATG
CAGCATGGGC TGTTGTTGGC GCTGGCCATG ATCTATTTAA TTCTGGCTGG GGTGTTTTCT
TCCTACGGCT GGCCTTTAGT GGTTATGGCT GCCATTCCCT TCGGTTTGAT TGGGGCTATT
CTGGGCCATT ATGTCATGGG GATCGATCTC ACGATTTTGT CCTTGTTTGG TTTCTTCGGT
CTTTCCGGTA TCGTGGTGAA TGATTCTATT ATTTTAGTCA CCTTTTACAA GCAACTCCGG
GAACAGGGTC ATCCCTGTGA CATCGCCTTG GTGGAAGCGG CCTGCCAACG TCTGCGGGCT
GTTTTGTTGA CTTCCTTGAC CACCATTGCT GGTTTGACGC CTTTACTCTT TGAGCGCTCT
TTCCAGGCTC AGTTTTTGAT CCCCATGGCG GTCTCCATTT CTTTTGGTTT GATGTTTTCT
ACCGTGCTGG TGCTATTGGT TATTCCCGCC TTGCTCTCCA TTTATGAGCG TACGTTGCTC
TGGTTTAAAC CATCCCCGGA AGAGGATATT GCCTCGGAGC CCGAAGTCGC CGCAGATGCC
GGGCAAGCCC CTGTTCGCCG TTTATCGGGT ATTTCCGAAT AA
|
|---|
| Protein sequence | MGLFVRHRVA ANLLMVIMIL SGTWALSQLN RQFFPNFALD IITVSVVWRG ASAEDVSRSI
TERLEEELRA LDDLKKLDST SAYGLATLTL EYYEGTDMGI ALDKVKERIG QIRELPLDSE
TPEIRLVSRY ENIARVLVTG PEDPQELRRL VHKFERDLLN RGIAKVDIAG LPQQEIAIQI
PVGNLRELEM SLGQVANRVA DISRDLPAGT IGRDDVARQL RSLDQRRDSR AFADIPLTAQ
SDGRLIRLGD VATIERRDRD GETRLFYQGK PAVELQLKRT ESGDSLQGAE ILIQWLQAVR
PTLPEGIKLH LFDQSWELVK ERIGLLLKNG GGGLVLVVGI LFLFLSGRVA IWVAIGIPVS
FLATLAVLWV AGGSINMISL FALIMALGII VDDAIVVGED ALAQHQQGLS PLAAAEGGAR
HMLLPVLASS LTTVAAFLPL MLIGDVTGNI LFDIPLVVIC VILASLVESF LVLPGHLRYS
FEKMKIGREG KVRLRLNQVF DRFRKRIFRP LALFAIQNRW ITVSAALGLL LVVLGLLLGG
RISFTFFPSP EGKVVYANTS FAPGTPPQRV AAFIMELERT LYDTEAAFGQ DLIVASIVKL
GSATTAGGRA ARNGDRFGSI TVELVSPDRR EVRNQAFIQA WQERIKLPPG IESFTLSERQ
TGPPGQDLDI VLLGEDERAL KGAAVELAEA LSKIPGVSAV EDDLPYGQEQ LIYRLTPEGQ
SLELTVEAVG RQLRAAYEGR LVQIFQDGGD EIEVRVLLPD NERYRLASLT HLAIQLPNGG
IAPLDTVVDL ESRRGFDVLR HTQGKLAVHV SGNVDRKVNN SNRILAGLEH SFLPELRTRY
GIQTLFEGRA EEQRDTLGDM QHGLLLALAM IYLILAGVFS SYGWPLVVMA AIPFGLIGAI
LGHYVMGIDL TILSLFGFFG LSGIVVNDSI ILVTFYKQLR EQGHPCDIAL VEAACQRLRA
VLLTSLTTIA GLTPLLFERS FQAQFLIPMA VSISFGLMFS TVLVLLVIPA LLSIYERTLL
WFKPSPEEDI ASEPEVAADA GQAPVRRLSG ISE
|
|---|
| |