Gene Noc_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2934 
Symbol 
ID3705363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3319430 
End bp3320329 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content54% 
IMG OID637739411 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_344909 
Protein GI77166384 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGCAAT CGTTACCGGA TCAATTACAT ACCTTGCGGG ATTTTATCCG CTGGGGTGCT 
AGCCGCTTTA ACGAGGCGGG GCTTTTTTTT GGCCATGGCA CCGACAATGC CATTGACGAG
GCCACCGCCT TGATTCTTCA TACCCTTCAT CTACCCCCTC GGGATCTGCC GCCGGAGCTT
TTTGGCGCCC ACCTGACTGA AGTAGAAAAA CATAAAGTAT TGGCCTTGCT GGAGCGTCGG
ATTCGAGAGC GGATTCCGGT CCCTTATCTT ACCCGCGAAG CCTGGTTTGC CGGACTGAGC
TTTTATGTGG ATGAGCGGGT TTTAATTCCC CGCTCGCCCC TGGCTGAACT CATTGCTCAA
CGCTTTGCGC CTTTTGCTTT CCCCGAAAGC ATTCATTCTC TGCTCGATCT ATGCACGGGC
AGTGGTTGCA TCGCTATTGC CGCCGCCCAT GCTTTCCCCG AAGCGCAAGT AGATGCCACC
GATATCAGCG AAGAAGCGCT AGCGGTAGCG CGCATGAATA TCGAGCGCCA TGGTCTTGAA
GCCCAGGTCC ATGCCTTCTC TTCCTCTCTT TTCCAGAAAC TCGGGGGGCG GCGCTATGAT
CTCATTGTCA GTAATCCCCC CTATGTAGGT CAGACGGAGC TGGCCGCCTT GGCGAGGGAA
TACCATCATG AACCTCGGCA GGCTCTGGAG GCCGAGGAGG ATGGGTTAAG CATCGTCCTG
CAAATTTTGC GGCAAGCTCC CGAGCATCTA AATGAAAAAG GAATTCTTAT CGTTGAGGTG
GGCAATAGTG AAGCGGCGCT GATCGAACAC CTGCCCCAGG TGCCTTTTTT ATGGCTGGAA
TTTGAGCGGG GTGGCCACGG CGTGTTTCTG CTAACGCGGG AACAGCTTGA GTATTTATAA
 
Protein sequence
MEQSLPDQLH TLRDFIRWGA SRFNEAGLFF GHGTDNAIDE ATALILHTLH LPPRDLPPEL 
FGAHLTEVEK HKVLALLERR IRERIPVPYL TREAWFAGLS FYVDERVLIP RSPLAELIAQ
RFAPFAFPES IHSLLDLCTG SGCIAIAAAH AFPEAQVDAT DISEEALAVA RMNIERHGLE
AQVHAFSSSL FQKLGGRRYD LIVSNPPYVG QTELAALARE YHHEPRQALE AEEDGLSIVL
QILRQAPEHL NEKGILIVEV GNSEAALIEH LPQVPFLWLE FERGGHGVFL LTREQLEYL