| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2927 |
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| Symbol | |
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| ID | 3705356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3309584 |
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| End bp | 3312616 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637739404 |
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| Product | Type III restriction enzyme, res subunit |
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| Protein accession | YP_344902 |
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| Protein GI | 77166377 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00341327 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCC AATTTGAAGA CGATCTGGAT TACCAAAAAG CCGCGATAGA CTCGGTTGTC
AGTCTGTTTA AAGGACAGGA AATATCCCGC TCTGAATTCA CCGTGACATT CCAGCCGGAG
TCTAGCCTCA ACTTATCTTT GGGTTTGGAG GAGAATCAGC TCGGTATCGG CAACAGGCTC
TTGTTGGTTG ATGAAGAAAT TGAAGAAAAC CTGCGTAAGG TGCAACTTCA GAATGGCCTG
CGGCCTACCA AGAAGCTAGC CAGCGGAGAC TTTACCGTTG AAATGGAGAC CGGAACGGGC
AAGACCTACG TGTATTTGCG CACGATCTTT GAACTGAACA AGAACTACGG CTTCACCAAG
TTCGCGATTG TCGTGCCGTC CATTGCGATT AAGGAAGGTA CTTATAAGAC GCTGCAAATC
ACGCAAGAGC ATTTTGAAGG CTTGTACCCG AAGGCCAAGG GCTACGAATA CTTCCTCTAT
GATTCCTCCA AGCTGGGTCA GGTGCGCAAC TTCGCTACCA GTTCCAATAT CCAGATCATG
GTGACGACGG TCGGCGCGAT CAATAAAAAG GATGTCAACA ATCTATACAA GGAAAACGAG
AATACAGGTG GTGAAAAGCC GATTGACCTT GTTCGCGCCA CGAACCCGAT CATTATTGTC
GATGAGCCAC AAAGCGTTGA CGGTGGCCTG ACAGGCAAAG GCAAGGAAGC GCTCACGGCG
ATGAATCCGT TGTGCACCCT GCGTTATTCC GCGACCCATG TGGACAAGCA TCACATGACC
TTCCGCTTGG ATGCCGTGGA CGCCTATGAG CGAGGCTTGG TTAAGCAGAT TGAGGTGGCG
TCACTCCAGA TCGACAGTGG ACACAACAAA CCCTATATCC GGCTGGACTC CACGGATAAC
CGGAAAGGAT CAATTACCGC CAAAGTGGAA GTGGATGTTC AGCGCGGCAA GAATGTCCGG
CGAGAATTCC TAACCGTGGA GGACGGCGAC GATCTGGAGC AGATCACAGG CCGCTCCATT
TATGAAAACA TGCAGATGGG TACCATTACC TGTGGCAAAG ATAATGAGTC CATTGAGGTC
AAGGGCGACG GCTTCGATCA ACGGCTTCGA CCAGGCGAGG CCATTGGTGG CGTTGATCCC
GACCAAATCA AGCGCTTGAT GATCCGGCGA ACCATCAAGG AGCACTTCGA TAAGGAGCTG
ATGTTCGCTG CGAACAAGAA GCCAATCAAA GTGCTCAGCC TATTTTTCAT TGATAGTGTC
ACGCACTACC GCCAGTACGA CGAGGACGGT AACGCTGTTA AGGGCAAGTA CGCTCGGATG
TTCGAGGAGG AATACCGCAA GCTGGCCAAG TCAGCGGATT ATCAAAGCCT GTTCAGGGAA
ATTGATCTGG AGGCTGGGGC GGACGAGGTG CATAACGGCT ATTTTTCTAT TGATAAGAAA
GGCCGATCTG TCGACACCGC CGAGAATAAT CAGGCGAACC GCGACAATGC AGAGCGGGCA
TACAACCTGA TTATGAAGGA GAAGGAAAAG CTACTGAGCT TTGATACCAA GCTGAAATTC
ATTTTTTCTC ACTCCGCTCT GAAGGAAGGT TGGGACAATC CCAACGTTTT CCAGATTTGC
ACGCTCCGCG ACATGGGAAG CGAACGGGAG CGACGCCAAA CCCTTGGCCG TGGCCTGCGT
CTCTGCGTCA ATCAGAATGG CGAACGGCTT CGCGGCAACG ACGTGAACAC GCTGACCGTA
ATTGCCACGG AAAACTACGA AAAATTTGCC GATAACCTGC AAAAAGAGAT CGAACAGGAT
ACGGGTATTC GCTTCGGCAT TGTCGAACCA CACCAATTCG CGACCATTCA AACCCTCAAC
GAACAAGGCG AGGTTGCACC TTTGGGGGTG GAACAGTCAG AGAAGATTTG GCAGTTCCTC
AAAGATCAGC AATTTGTGGA TGTAAAAGGT AAGGTGCAGG ACAGTCTTCG CGCCGCGTTG
AAAAACGGAA ACTTTGAGCT GCCAGAGGAA ATCAAGCAGG AGCTTGTCAA GAATCACGGA
GAGGAACAGA CTGATATAAT CACATCGGAT ATTCAGGCGG TTCTACGCAA GCTGGCTGGC
AAGCTGGATA TCAAGAACGC CGATGATCGG AAAATCATTC GAACGCGGGA AGCTGTTCTT
GAATCCGATG AGTTCCGGTT GCTCTGGGAG CGGATCAAGT ACAAGACCAC GTACCGTGTG
GAGTTCGACA ACCTGAAGCT CCTGAACGAT TGCGCCGACG CCATAAGAAG CTGCCCGCCG
ATTACCAAAA CCCGCGCCCA ATTCAGAAAG GCGGATATTG CTATCGGTAA AGGTGGCGTA
GGGGTTCAGG AAACCAGCGC TTCCGGCTAT ACCACAATCC ACGAAAATGA TATCGAGTTG
CCCGATATTA TTACCGACTT GCAGGACAAG ACCCAGCTCA CTCGAAAAAG TATCGTCCAG
ATACTCAGGG AGAGCCGAAG GCTTCAGGAC TTCCTGCGCA ATCCCCAGCA ATTCATCGAC
TATTGTTCCG AGGCGATTAA CCGTACTAAG CGGCTAGCGC TTGTTGACGG CATCAAATAC
ACTAAGATCG GTGACGATCA CGGCTATGCC CAGGCACTTT TTAAGCAGGA AGAGTTGAAA
GGCTATCTGA AGAATACGCT GGAAGTACAA AAATCCGTAT ACACCCATGT CGTGTATGAC
TCGGGAAGCG TGGAGAAGTC CTTCGCCGAA GACTTGGAGA AGAACGAAAG AGTTAAAGTT
TACGCCAAAT TGCCCCCGTG GTTCAAAGTG CCAACGCCGC TCGGTTCCTA TAACCCCGAT
TGGGCTGTCG TTGTGGAAGA TGGCGGTGAG GAAAAGCTCT ACTTTGTGGT TGAGACCAAA
GGCAGCGCGT GGTGGGATGA TTTACGCCAC CTTGAAGGAG CGAAGATCAA GTGCGGAGAA
CGGCACTTTG AAGAAATTGC AAAAGACACA GAAAACCCCG TCCGCTATAT CAAGGCAATG
GATGTTGCAG GGATGATGGG TCATGTGGAA TAG
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| Protein sequence | MKLQFEDDLD YQKAAIDSVV SLFKGQEISR SEFTVTFQPE SSLNLSLGLE ENQLGIGNRL
LLVDEEIEEN LRKVQLQNGL RPTKKLASGD FTVEMETGTG KTYVYLRTIF ELNKNYGFTK
FAIVVPSIAI KEGTYKTLQI TQEHFEGLYP KAKGYEYFLY DSSKLGQVRN FATSSNIQIM
VTTVGAINKK DVNNLYKENE NTGGEKPIDL VRATNPIIIV DEPQSVDGGL TGKGKEALTA
MNPLCTLRYS ATHVDKHHMT FRLDAVDAYE RGLVKQIEVA SLQIDSGHNK PYIRLDSTDN
RKGSITAKVE VDVQRGKNVR REFLTVEDGD DLEQITGRSI YENMQMGTIT CGKDNESIEV
KGDGFDQRLR PGEAIGGVDP DQIKRLMIRR TIKEHFDKEL MFAANKKPIK VLSLFFIDSV
THYRQYDEDG NAVKGKYARM FEEEYRKLAK SADYQSLFRE IDLEAGADEV HNGYFSIDKK
GRSVDTAENN QANRDNAERA YNLIMKEKEK LLSFDTKLKF IFSHSALKEG WDNPNVFQIC
TLRDMGSERE RRQTLGRGLR LCVNQNGERL RGNDVNTLTV IATENYEKFA DNLQKEIEQD
TGIRFGIVEP HQFATIQTLN EQGEVAPLGV EQSEKIWQFL KDQQFVDVKG KVQDSLRAAL
KNGNFELPEE IKQELVKNHG EEQTDIITSD IQAVLRKLAG KLDIKNADDR KIIRTREAVL
ESDEFRLLWE RIKYKTTYRV EFDNLKLLND CADAIRSCPP ITKTRAQFRK ADIAIGKGGV
GVQETSASGY TTIHENDIEL PDIITDLQDK TQLTRKSIVQ ILRESRRLQD FLRNPQQFID
YCSEAINRTK RLALVDGIKY TKIGDDHGYA QALFKQEELK GYLKNTLEVQ KSVYTHVVYD
SGSVEKSFAE DLEKNERVKV YAKLPPWFKV PTPLGSYNPD WAVVVEDGGE EKLYFVVETK
GSAWWDDLRH LEGAKIKCGE RHFEEIAKDT ENPVRYIKAM DVAGMMGHVE
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