Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2891 |
Symbol | |
ID | 3707445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3269714 |
End bp | 3270163 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637739367 |
Product | general secretion pathway protein H |
Protein accession | YP_344867 |
Protein GI | 77166342 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.293786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAGGA GCCAGCGGGG GTTCTCCTTA CTTGAAGTAT TGGTAGCCTT CGCTATTCTG GGAGTCGCGC TGGGAGTATT ACTCCAGATT TTTGCCACCG GGATGCGGGC CACTACATTA TCGGAGGACT ATACTTATGC TGCCTCACTC GCGGAGACTA AGCTTGCGGC TATTGGGGTG GAGGCGCCCT ATTTAGAAGG AGTTGAAGAG GGAAAATTCG ACCAGAAATA TAGCTGGCGC ACCACTATCC TTCCCTATGT GGAACCAGAG GAAGCCCTGG AAGAACTAGA AAGACGGCAA ATAAATCAGG GAGGAGGCTT TGATAATAAT CCGATAAATC TCCCTGTTCT TCCTTACCAG GTCAGAGTAG AAGTGTTTTG GGAAACAGGG GGGGGCAAGG TGCGAGAGGT TGTCCTCGAA ACTTTACGCC TGGGAGCAAT CCTGCCCTAG
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Protein sequence | MIRSQRGFSL LEVLVAFAIL GVALGVLLQI FATGMRATTL SEDYTYAASL AETKLAAIGV EAPYLEGVEE GKFDQKYSWR TTILPYVEPE EALEELERRQ INQGGGFDNN PINLPVLPYQ VRVEVFWETG GGKVREVVLE TLRLGAILP
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