Gene Noc_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2891 
Symbol 
ID3707445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3269714 
End bp3270163 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content51% 
IMG OID637739367 
Productgeneral secretion pathway protein H 
Protein accessionYP_344867 
Protein GI77166342 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.293786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAGGA GCCAGCGGGG GTTCTCCTTA CTTGAAGTAT TGGTAGCCTT CGCTATTCTG 
GGAGTCGCGC TGGGAGTATT ACTCCAGATT TTTGCCACCG GGATGCGGGC CACTACATTA
TCGGAGGACT ATACTTATGC TGCCTCACTC GCGGAGACTA AGCTTGCGGC TATTGGGGTG
GAGGCGCCCT ATTTAGAAGG AGTTGAAGAG GGAAAATTCG ACCAGAAATA TAGCTGGCGC
ACCACTATCC TTCCCTATGT GGAACCAGAG GAAGCCCTGG AAGAACTAGA AAGACGGCAA
ATAAATCAGG GAGGAGGCTT TGATAATAAT CCGATAAATC TCCCTGTTCT TCCTTACCAG
GTCAGAGTAG AAGTGTTTTG GGAAACAGGG GGGGGCAAGG TGCGAGAGGT TGTCCTCGAA
ACTTTACGCC TGGGAGCAAT CCTGCCCTAG
 
Protein sequence
MIRSQRGFSL LEVLVAFAIL GVALGVLLQI FATGMRATTL SEDYTYAASL AETKLAAIGV 
EAPYLEGVEE GKFDQKYSWR TTILPYVEPE EALEELERRQ INQGGGFDNN PINLPVLPYQ
VRVEVFWETG GGKVREVVLE TLRLGAILP