Gene Noc_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2884 
Symbol 
ID3707438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3262983 
End bp3264098 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content47% 
IMG OID637739360 
ProductUrea transporter 
Protein accessionYP_344860 
Protein GI77166335 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4413] Urea transporter 
TIGRFAM ID[TIGR03441] urea transporter, Yersinia type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCAT TAAAAATAAT GATAAAAGCT GTCAGCGTTT TGCTGCGAGG CGTTGGGCAA 
GTTGTATTTC AGAACAATCC TATCTCAGGG CTGGTTATTC TAACCGGCCT TTTTTTTGCT
TCTTTAGCAG CGGGAACGGC AGCTTTAGTG GGAGTGATCG TCAGTACTCT GACAGCCGTT
TTATTAAAGG TTGATAAGGA TCTTATTGGG GCTGGGTTGT TGGGTTTTAA TGGCGTTTTG
GTAGGGATCG CGATCAGTCT TTATAGTAGT CATAATGTTA CCCTGGGTGA TCTGCCGGTT
TGGAAGATAT GGTCTCTGGT TGTGATGGGA TCAGCTTTCT CAACGGTGGT GATGATGGCG
CTCAGCAGGT TTCTTTCTCC CTGGAACATG CCTGCTTTGA CCATGCCCTT TGTGTTGTGC
GCTTGGATAT TCGTAGGATC GGTTGAGCAT ACCGTCAAGC TTGAAACGCC GGGCGCCTTG
GAGAGCTATG CCTACCAACT TTTTCAGCCT GAGATTGGCC ACCGTATAGA AGAATATCGG
CAATACACTT TAGAAACCTG GTACATGGGC ATTGGCAAGG GATTCAGTGA GATTTTTTTG
CAAGATAGCG CCATTGCGGG ATATCTAATT TTACTGGGGA TTCTCATTAA TTCCCGTATC
AGCGCAATCA TGGGTTTGCT AGCAGCGTTG CTATCTATTA CGGCAGCCAT GCTATTTGGT
GTGACTGAGG AGAGTATTCG ACTAGGACTT CACAGTTATA ATCCAATTTT AACGGCATTA
GCGGTCGTCT TATTTGTTCG TTTTACTATC AGTTCTGGCT TCTATGCTTT GTTTGGCGTG
GTGGTTACCG TTTGGGTGAG TTTGGCGGTT GGGCTTGCCC TGTATCACCT GGAATTTCCC
GTTTACACTT TCCCCTTTGT TATCGTTACC TGGGCGCTGC TGCTCGGGGC GATGAGTGTT
GGCAGATTAA GATATATTCT GCCAGCGGAA GCTCTTACCC CGGAAGCCAA TTTAGCTCGC
TTTGCGGCCC AGGAAATTGA GGGGGCCCCT GAAAAAAGGC GTGATTCGCC GCATCAGCTG
GACCCAGAAA AGCCGATGGA GGATCAAAGG GAATAG
 
Protein sequence
MQSLKIMIKA VSVLLRGVGQ VVFQNNPISG LVILTGLFFA SLAAGTAALV GVIVSTLTAV 
LLKVDKDLIG AGLLGFNGVL VGIAISLYSS HNVTLGDLPV WKIWSLVVMG SAFSTVVMMA
LSRFLSPWNM PALTMPFVLC AWIFVGSVEH TVKLETPGAL ESYAYQLFQP EIGHRIEEYR
QYTLETWYMG IGKGFSEIFL QDSAIAGYLI LLGILINSRI SAIMGLLAAL LSITAAMLFG
VTEESIRLGL HSYNPILTAL AVVLFVRFTI SSGFYALFGV VVTVWVSLAV GLALYHLEFP
VYTFPFVIVT WALLLGAMSV GRLRYILPAE ALTPEANLAR FAAQEIEGAP EKRRDSPHQL
DPEKPMEDQR E