Gene Noc_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2873 
Symbol 
ID3705586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3254884 
End bp3255381 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content47% 
IMG OID637739349 
ProductIS630 family transposase 
Protein accessionYP_344849 
Protein GI77166324 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA AGAGCTTTCT TCGCCTTCGT GAACGCTATC GCCGCCGCGG CAAAAGATTT 
GTCTATCTTG ATGAAAGCGG TTTTGAGCCG GAGGTTTCCC GTCGTTACGC TTACGCTCCA
AAGGGGCGGC GTGTTTATGG TCTGATCTCC GGTCATCGCA GACCGCGAAC CTCTTTATTG
GCCGCCCGTA TGGATGAAGG CTTTGAAGCG CCGTTTCTAT TTGAGGGAAC CTGTAACACG
GCTGTGTTCA ATGCATGGCT GGAAAAAGAG CTTTGCCCCT TGCTCAACAG CAACCACATT
GTCATCATGG ATAATGCTCC GTTCCACAAA GCCGTTTCTT CACGTGAAAT CATCAAAAAA
ACAGGGGCGG GAATTTTATT CCTCCCCCCT TATTCCCCTG ACTTTAACCC CATAGAAAAA
GACTTCGGAA ATATCAAAAA AATCAGAGAA TACAACGAAC ATGAAACCCT TGAGAATATC
GTTGCAGCGT ATCAGTAA
 
Protein sequence
MKRKSFLRLR ERYRRRGKRF VYLDESGFEP EVSRRYAYAP KGRRVYGLIS GHRRPRTSLL 
AARMDEGFEA PFLFEGTCNT AVFNAWLEKE LCPLLNSNHI VIMDNAPFHK AVSSREIIKK
TGAGILFLPP YSPDFNPIEK DFGNIKKIRE YNEHETLENI VAAYQ