Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2845 |
Symbol | |
ID | 3705537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3222196 |
End bp | 3223173 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637739321 |
Product | peptidase S49, SppA |
Protein accession | YP_344821 |
Protein GI | 77166296 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.25989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAACC AAGATCCATC TACGACCGAT CTAAGCAAAA CACAGGCAAT CCAGCGCAAC TGGGAGCGAG AGGTCTTGGA GCGTTTGGCT TTTAGCGCTC TTAAAGAACA GCGGCGGGCG CGTCGTTGGA GTATTTTTTT CAAACTACTC TTTGCTGCCT ATTTACTCGT TCTCTTGCTG CTTTATCTTC CTAATGGGCT TAGCGCTCCA GGAATAATTA CGCCCCACAC TGCCTTAGTA AAAATAGAAG GGATCATTGG CAGCGACTCA TTTGCAAATG CGGAAAATAT AAAAAAAGGA CTAAAAGCCG CCTTTGAGAA CGAACATATC GCTGGGTTAA TTCTGCATAT CAATAGTCCT GGCGGCAGCC CAGTCCAGGC AAACCAAATC AACGACCAAA TCCATCAATT GCGCAAAGAA CATCCTAATA TCCCTATCCA CGCCGTTATT ACAGACATCT GCGCCTCGGG AGGATATTAC ATTGCGGTAG CGGCAGATCA AATTTATGCG GACAAAGCAA GTATCGTGGG TTCCATTGGT GCTCTGATCA ATAGTTTCGG CTTCGTTGAA GCTATGGAAA AACTGGGAAT TGAGCGGCGC CTCTTTACTG CAGGCGACTA TAAAGGTTTC CTTGATCCGT TCTCGCCTAT GAAAGAATTC GAATCCCAAC ATATCCAAAA GATGCTAGAC AACATCCACA AGCAATTCAT TCAGGTTGTA AAAGACAACC GCGGAGAACG ACTCAAGAAC GATTCTTCCC TATTCAGCGG ATTAGTCTGG ACAGGCGAGC AAGCCATCGA TCTAGGATTG ATCGATGGCT TGGGAAACAG CAACTACGTG GCTCGCGAGA TCATAGGAGC GGAAAAAATT GTCGATTACA CCCCCCAGCC CAAGCTCCTA GATCGCTTCT CTCGCCAGCT TGGAGCCACT TTCGCTAATA TGCTATCCGG CTTCACCCTT GCGGCTAATA CAAGATAG
|
Protein sequence | MSNQDPSTTD LSKTQAIQRN WEREVLERLA FSALKEQRRA RRWSIFFKLL FAAYLLVLLL LYLPNGLSAP GIITPHTALV KIEGIIGSDS FANAENIKKG LKAAFENEHI AGLILHINSP GGSPVQANQI NDQIHQLRKE HPNIPIHAVI TDICASGGYY IAVAADQIYA DKASIVGSIG ALINSFGFVE AMEKLGIERR LFTAGDYKGF LDPFSPMKEF ESQHIQKMLD NIHKQFIQVV KDNRGERLKN DSSLFSGLVW TGEQAIDLGL IDGLGNSNYV AREIIGAEKI VDYTPQPKLL DRFSRQLGAT FANMLSGFTL AANTR
|
| |