Gene Noc_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2839 
Symbol 
ID3705531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3215161 
End bp3215976 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content48% 
IMG OID637739315 
Producthypothetical protein 
Protein accessionYP_344815 
Protein GI77166290 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCCAA AACGCCGCCC TTTACCAGAA AGTTATCGGA ATGAGGAATT CCTCTCTAGC 
CGCGAGGCGC GATCACTTCG GATTCTTTCC GAGTACCTGG AACCCCAACG CCGTTTTGCA
CGCTATAAGG TGGATGATAC CGTGGTTTTC ATGGGCTCGG CGCGCACTCT CCCGCAAGCA
CAAGCCGAAC AGGCACTTAA AGAAGCTAAA GAAAGCACGG GTGATATCAG CAAAGCAGAA
CGACAGCTTG AAATGTCGAA GTACTATGAG GCCGCGCGGG AATTGGCGCG CCGCCTAACG
GAATGGTCCA AGGCATTAAG TGATGAGGAA CGGCGCTTTG TAGTATGTAC GGGCGGCGGA
CCAGGAATCA TGGAGGCTGC TAACCGAGGA GCCTCCGAAG CAAAGGGGAT GAACATTGGG
CTGACCATCT CCATCCCCAT TGAGGAATTT GATAACTCCT ATATCACTCG CGAACTTTCG
TTTCACTTTC ACTATTTTTT TATGCGCAAG TTTTGGTTCG CTTATTTAGC CAAAGCTATT
ATCGTCTTTC CAGGTGGATT TGGTACGCTT GACGAATTAT TTGAACTCCT CACTCTGATG
CAGACTGGTA AAATCCGCAA ACACCTTCCT ATTATCCTCT TTGGAAAGGC CTATTGGAAT
GAAGTTATTA ACTTTGATGC TCTAGTCCGG TACAGTAATA TCGATCCTCA AGATTTAGAT
TTGCTCTATC AGACCGACTC GGTTGATGAA GCTTATGCCT TTCTCATCGA TCATCTCACC
CGGTATGCAA TTGAGGAGCG GGGAGCAATT CTTTAA
 
Protein sequence
MPPKRRPLPE SYRNEEFLSS REARSLRILS EYLEPQRRFA RYKVDDTVVF MGSARTLPQA 
QAEQALKEAK ESTGDISKAE RQLEMSKYYE AARELARRLT EWSKALSDEE RRFVVCTGGG
PGIMEAANRG ASEAKGMNIG LTISIPIEEF DNSYITRELS FHFHYFFMRK FWFAYLAKAI
IVFPGGFGTL DELFELLTLM QTGKIRKHLP IILFGKAYWN EVINFDALVR YSNIDPQDLD
LLYQTDSVDE AYAFLIDHLT RYAIEERGAI L