Gene Noc_2836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2836 
SymbolrplM 
ID3705527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3213037 
End bp3213465 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content52% 
IMG OID637739311 
Product50S ribosomal protein L13 
Protein accessionYP_344812 
Protein GI77166287 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT TCAGTGCCAA ACCCAAAGAA GTTCGACGCG ACTGGTATCT TGTAGACGCC 
AATGGGGTAA CCCTAGGACG CCTAGCAAGT GAGATCGCCC GGCGTCTGCG GGGAAAGCAT
AAAGCTATCT ACACCCCCCA TATCGATACT GGGGATTACA TTGTAGTGGT CAATGCGGAG
AAAATCCGCG CCACGGGCAA GAAAATGGCG CAGAAGCATT ACTACAGGCA CTCAGGCTAT
CCTGGTGGGA TTAAATCCCT CACTCTGGAG AAACTCCTTG AGCGGGCCCC CGAACGGGCA
ATAGAGCTCG CTGTCAAAGG AATGTTACCC AAAAATCCCT TGGGCCGTGC AATGTTTCGC
AAGCTAAACG TTTATGGGGG AAGCAACCAT CCCCACATTG CGCAACAGCC CCAACCCCTC
AAGATCTAA
 
Protein sequence
MKTFSAKPKE VRRDWYLVDA NGVTLGRLAS EIARRLRGKH KAIYTPHIDT GDYIVVVNAE 
KIRATGKKMA QKHYYRHSGY PGGIKSLTLE KLLERAPERA IELAVKGMLP KNPLGRAMFR
KLNVYGGSNH PHIAQQPQPL KI