Gene Noc_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2832 
Symbol 
ID3705523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3209478 
End bp3210488 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content53% 
IMG OID637739307 
ProductABC transporter, ATPase subunit 
Protein accessionYP_344808 
Protein GI77166283 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAATG ACCCGCGCTC TGTCGAGACC TTACCGTCCA AGCATGGTAG GATATTTGCT 
CCAAGCAATG ACTGTTCACG AGCAATGAAA GCACTGGTCA TCGAAAATCT GCAAAAAACC
TACAGCAACC ATTTTGTAGC TCTAAAAGGA ATAGATCTAG AGGTAGAACA AGGCGATTTT
TTCGCCCTGT TAGGCCCCAA TGGGGCAGGA AAATCCACCA CTATCGGCAT TATCTCCTCC
TTGATTACCA AAAGCGCCGG AAAAGTATCG GTCTTTGGCA TGGACCTGGA GCGGGAACCG
GAAGAAGCCA AGCGGATCAT TGGCCTCGTC CCTCAGGAAT TTAACTGTAA CGGCTTTGAA
AAAGTTTTTA ACATCTTGGT TACCCAGGCC GGGTATTACG GGATCGAGCC CAGAATCGCC
CGCACTCGCG CCGAACAACG GCTAAAGCAG CTGGGCCTGT GGGATAAACG CGACGAGTGC
GCCCGCACCC TTTCCGGGGG AATGAAGCGC CGCCTGATGA TCGCCCGCGC CCTGGTGCAT
GATCCCCGCC TCCTGATCCT AGATGAGCCC ACGGCCGGAG TCGATATTGA GCTGCGCCGC
TCCATGTGGC AATTTCTCCA GGAAACCAAC ACTGAAGGGA CTACGATCAT TTTAACCACC
CACTACCTGG AGGAAGCTGA AAGACTCTGC CGCAACATTG CCATTATTGA CCGCGGTGCC
ATCATTGAGC ATAACTCCAT GAAAACCTTA CTGACCAAAC TCAACCGAGA GACCTTCATC
CTCTACCTTA AAGAACCGCT GAATTTTACC CCCGCTCTCC CCAACTATCC TCTCCATCGC
GTGGATGACA CGACCCTGGA AGCGGAAGTC CGCAAGGAGG AGGATCTTAA TACCCTCTTT
GCAGCCCTTT CCAAGGAAGG GATTCGGGTG CTAAGCATGC GGAATAAAGC CAACCGGCTG
GAAGAGCTCT TTATAGACCT CATCACCCCT AGCGATACGC TTGCCGCATG A
 
Protein sequence
MGNDPRSVET LPSKHGRIFA PSNDCSRAMK ALVIENLQKT YSNHFVALKG IDLEVEQGDF 
FALLGPNGAG KSTTIGIISS LITKSAGKVS VFGMDLEREP EEAKRIIGLV PQEFNCNGFE
KVFNILVTQA GYYGIEPRIA RTRAEQRLKQ LGLWDKRDEC ARTLSGGMKR RLMIARALVH
DPRLLILDEP TAGVDIELRR SMWQFLQETN TEGTTIILTT HYLEEAERLC RNIAIIDRGA
IIEHNSMKTL LTKLNRETFI LYLKEPLNFT PALPNYPLHR VDDTTLEAEV RKEEDLNTLF
AALSKEGIRV LSMRNKANRL EELFIDLITP SDTLAA