Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2812 |
Symbol | |
ID | 3705561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3188857 |
End bp | 3189489 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637739288 |
Product | GrpE protein |
Protein accession | YP_344789 |
Protein GI | 77166264 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0237715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACG AAGAGAGAAC TATTCCGGAG ACTAATGTCG CGTCTGAACG GCCGGAAGAT CCGGTAGAAT CCCAGACGCG AGCCGAGGGC GGCGAGCAAA TCCAGGAGGC AGCCCCCGAG ACTGCTGAGC TGGAGGCTGT CCAGCAACTT TTGGAGGATG CCCGCAGCAA GGCGGATGAA CATTGGAATG AGTTGCTGCG CGCGCGAGCT GAGCTGGAGA ATCAGCGTCG GCGCCATGAA CGGGAATTGG AAAAGGGCCG CAAGTATGCC TTGGAGAAAT TTGCCCAGGA TTTATTACCG GTTAAGGATA GTCTAGAGAT GGGATTAGCG GCAGCCCAGG CTGAAGATGC CAATGTGACT GCTTTGCGGG AAGGGACTGA ATTAATTCTT AAGATGTTCA ATGAAGTTGC AGCCCGATTT GGCATTGAGA CGATTGATCC CCAAGGAGAA GCCTTTAACC CTGACTTTCA CCAGGCTATA TCTACCCAGG AGAGCAGTGA GGCTGCCCCT GACACTGTGC TTACCGTTGT TCGTAAAGGC TATGCTTTAA ATGGCCGCCT GTTACGTCCG GCCATGGTCG TAGTTTCCAA ACCGGGTGAA CAAACCACAG CAGGGGTGGA TACTCAAGCT TGA
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Protein sequence | MANEERTIPE TNVASERPED PVESQTRAEG GEQIQEAAPE TAELEAVQQL LEDARSKADE HWNELLRARA ELENQRRRHE RELEKGRKYA LEKFAQDLLP VKDSLEMGLA AAQAEDANVT ALREGTELIL KMFNEVAARF GIETIDPQGE AFNPDFHQAI STQESSEAAP DTVLTVVRKG YALNGRLLRP AMVVVSKPGE QTTAGVDTQA
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