Gene Noc_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2812 
Symbol 
ID3705561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3188857 
End bp3189489 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content54% 
IMG OID637739288 
ProductGrpE protein 
Protein accessionYP_344789 
Protein GI77166264 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0237715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACG AAGAGAGAAC TATTCCGGAG ACTAATGTCG CGTCTGAACG GCCGGAAGAT 
CCGGTAGAAT CCCAGACGCG AGCCGAGGGC GGCGAGCAAA TCCAGGAGGC AGCCCCCGAG
ACTGCTGAGC TGGAGGCTGT CCAGCAACTT TTGGAGGATG CCCGCAGCAA GGCGGATGAA
CATTGGAATG AGTTGCTGCG CGCGCGAGCT GAGCTGGAGA ATCAGCGTCG GCGCCATGAA
CGGGAATTGG AAAAGGGCCG CAAGTATGCC TTGGAGAAAT TTGCCCAGGA TTTATTACCG
GTTAAGGATA GTCTAGAGAT GGGATTAGCG GCAGCCCAGG CTGAAGATGC CAATGTGACT
GCTTTGCGGG AAGGGACTGA ATTAATTCTT AAGATGTTCA ATGAAGTTGC AGCCCGATTT
GGCATTGAGA CGATTGATCC CCAAGGAGAA GCCTTTAACC CTGACTTTCA CCAGGCTATA
TCTACCCAGG AGAGCAGTGA GGCTGCCCCT GACACTGTGC TTACCGTTGT TCGTAAAGGC
TATGCTTTAA ATGGCCGCCT GTTACGTCCG GCCATGGTCG TAGTTTCCAA ACCGGGTGAA
CAAACCACAG CAGGGGTGGA TACTCAAGCT TGA
 
Protein sequence
MANEERTIPE TNVASERPED PVESQTRAEG GEQIQEAAPE TAELEAVQQL LEDARSKADE 
HWNELLRARA ELENQRRRHE RELEKGRKYA LEKFAQDLLP VKDSLEMGLA AAQAEDANVT
ALREGTELIL KMFNEVAARF GIETIDPQGE AFNPDFHQAI STQESSEAAP DTVLTVVRKG
YALNGRLLRP AMVVVSKPGE QTTAGVDTQA