Gene Noc_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2787 
Symbol 
ID3705517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3162223 
End bp3163038 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID637739263 
ProductVacJ-like lipoprotein 
Protein accessionYP_344764 
Protein GI77166239 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000448143 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATA CATTTATAAT GGCACTATGG GCCAAGCTCA CGCTACTAGG AATACTCCTC 
GGCTTATCAG CTGGCTGCGC GACTAATGCT ACCTATGATG CCTCCCATGA CCCCTTTGAA
GGCTTTAACC GCGCCATTTA TAAATTTAAT GATACCGCCG ACCGCTATGT CATGAAGCCC
ATTGCAAAGG GCTATGATAA AGTCGTGCCT ACCCCGGTTG ACAAAAGTAT TACTAATTTT
TTTAGCAATC TTCATGATTT GGTTGTTGGC GTAAACAGCA TCTTTCAAGG TAAATTCCAC
CAGGGACTAA CAGATTTTGC TCGATTCCTA GCAAATAGCA CTGTGGGGAT TGGCGGTCTG
TTTGATGTGG CTACTTCTGG CGGCATGGTT AAACACGACG AAGATTTTGG ACAAACCCTA
GGAGTCTGGG GATTTAATAC TGGCCCTTAT TTGGTTTTAC CCCTCCTTGG GCCCAGTAAT
ATTCGAGATG GAATAGGGCT GGGAGTCGAT GTGCTAGCCT GGCCTGTCAC CTATATAGGA
AATACCGGGA TAGGGTTAGG GCTAGCAGGA TTACGGACCG TGGATCTCCG GGCGGATTTG
CTTGAGGCGA CCGATATTCT AAAGGAAGCC GCCCTAGATC CCTATGTCTA TACCCGGGAA
GCCTTTCTGC AGCGTCGTAA ATTCCTGGTA CACGACGGCA AAATACCTAA GGAAGAAGTA
CCTGAAGAGG AATTCGAATT CGATGAGGAA GAAGAGATAT CTGAGGAACC TGCAGAGCCT
TCTGCCCCAT TTCCTCCTTA TTTTCCAGGC CATTAA
 
Protein sequence
MNYTFIMALW AKLTLLGILL GLSAGCATNA TYDASHDPFE GFNRAIYKFN DTADRYVMKP 
IAKGYDKVVP TPVDKSITNF FSNLHDLVVG VNSIFQGKFH QGLTDFARFL ANSTVGIGGL
FDVATSGGMV KHDEDFGQTL GVWGFNTGPY LVLPLLGPSN IRDGIGLGVD VLAWPVTYIG
NTGIGLGLAG LRTVDLRADL LEATDILKEA ALDPYVYTRE AFLQRRKFLV HDGKIPKEEV
PEEEFEFDEE EEISEEPAEP SAPFPPYFPG H