Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2787 |
Symbol | |
ID | 3705517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3162223 |
End bp | 3163038 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637739263 |
Product | VacJ-like lipoprotein |
Protein accession | YP_344764 |
Protein GI | 77166239 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000448143 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATA CATTTATAAT GGCACTATGG GCCAAGCTCA CGCTACTAGG AATACTCCTC GGCTTATCAG CTGGCTGCGC GACTAATGCT ACCTATGATG CCTCCCATGA CCCCTTTGAA GGCTTTAACC GCGCCATTTA TAAATTTAAT GATACCGCCG ACCGCTATGT CATGAAGCCC ATTGCAAAGG GCTATGATAA AGTCGTGCCT ACCCCGGTTG ACAAAAGTAT TACTAATTTT TTTAGCAATC TTCATGATTT GGTTGTTGGC GTAAACAGCA TCTTTCAAGG TAAATTCCAC CAGGGACTAA CAGATTTTGC TCGATTCCTA GCAAATAGCA CTGTGGGGAT TGGCGGTCTG TTTGATGTGG CTACTTCTGG CGGCATGGTT AAACACGACG AAGATTTTGG ACAAACCCTA GGAGTCTGGG GATTTAATAC TGGCCCTTAT TTGGTTTTAC CCCTCCTTGG GCCCAGTAAT ATTCGAGATG GAATAGGGCT GGGAGTCGAT GTGCTAGCCT GGCCTGTCAC CTATATAGGA AATACCGGGA TAGGGTTAGG GCTAGCAGGA TTACGGACCG TGGATCTCCG GGCGGATTTG CTTGAGGCGA CCGATATTCT AAAGGAAGCC GCCCTAGATC CCTATGTCTA TACCCGGGAA GCCTTTCTGC AGCGTCGTAA ATTCCTGGTA CACGACGGCA AAATACCTAA GGAAGAAGTA CCTGAAGAGG AATTCGAATT CGATGAGGAA GAAGAGATAT CTGAGGAACC TGCAGAGCCT TCTGCCCCAT TTCCTCCTTA TTTTCCAGGC CATTAA
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Protein sequence | MNYTFIMALW AKLTLLGILL GLSAGCATNA TYDASHDPFE GFNRAIYKFN DTADRYVMKP IAKGYDKVVP TPVDKSITNF FSNLHDLVVG VNSIFQGKFH QGLTDFARFL ANSTVGIGGL FDVATSGGMV KHDEDFGQTL GVWGFNTGPY LVLPLLGPSN IRDGIGLGVD VLAWPVTYIG NTGIGLGLAG LRTVDLRADL LEATDILKEA ALDPYVYTRE AFLQRRKFLV HDGKIPKEEV PEEEFEFDEE EEISEEPAEP SAPFPPYFPG H
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