| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2786 |
|---|
| Symbol | |
|---|
| ID | 3705516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3160901 |
|---|
| End bp | 3161785 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637739262 |
|---|
| Product | ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_344763 |
|---|
| Protein GI | 77166238 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000312244 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAG AACTGGATAC CCCGCTAGTC AAGATCCGAG GGCTACATTT TTCCCACGGA
AATCGCCCTA TTTTCAAGGG GGTAGATATT GACATTCAGC GAGGTAAAGT GACCACCATT
ATGGGGCCCA GCGGGACAGG TAAAACCACG CTCCTACGCT TGATTGGGGG GCAACTATCT
CCTGATGCAG GGACGGTGGA AGTCGATGGT CATCAGGTTT CTGCGCTATC CAGTGGGGAG
CTTTATGCTT TGCGTCAACG TATAGGGATG TTGTTTCAAA CAGGTGCTTT ACTTACTGGT
CTCTCGGTGT TTGATAATGT CGCTTTCCCA TTGCGAGAGC ATACTCGTTT ATCCGAGGCC
ATGATCCATG ATCTGGTGCT TATCAAGCTT CAGGCCGTGG GGCTGCGTTG TGCCCGCCAG
CTCATGCCTA GCGAGCTTTC TGGGGGTATG GCCCGGCGGG TAGCATTAGC GCGGGCGGTT
GCATTAGATC CTATGATGAT CATGTACGAT GAGCCTTTTA CAGGCCAAGA TCCCATCTCC
ATGGGTACTC TGGTACAGCT TATTCGTTTG CTCAACGATG CTCTTGGACT AACGAGTATT
ATTGTTTCTC ATGATGTCCA GGAGGCAACT CTTATATCGG ATTATATTTA CATCTTATCA
GGGGGACGAG TAGTGGAGCA TGGCACGCCT AGCGAGATTG ATCGTTCTTG TTCTGCGGCT
GTTAAGCAGT TCATGCGAGG GTTGCCTGAT GGGCCAGTGC CATTTCACTA CCCCGGCAGG
GACTACGCTG AAGACCTATT GGATATGGAG AAATCCCCCC CAACCCGTTC TCTAGGGCGT
TTAAAATACC TGCTGAGGCG GCATGCCGCA CCGGAGGTAT TGTGA
|
|---|
| Protein sequence | MSAELDTPLV KIRGLHFSHG NRPIFKGVDI DIQRGKVTTI MGPSGTGKTT LLRLIGGQLS
PDAGTVEVDG HQVSALSSGE LYALRQRIGM LFQTGALLTG LSVFDNVAFP LREHTRLSEA
MIHDLVLIKL QAVGLRCARQ LMPSELSGGM ARRVALARAV ALDPMMIMYD EPFTGQDPIS
MGTLVQLIRL LNDALGLTSI IVSHDVQEAT LISDYIYILS GGRVVEHGTP SEIDRSCSAA
VKQFMRGLPD GPVPFHYPGR DYAEDLLDME KSPPTRSLGR LKYLLRRHAA PEVL
|
|---|
| |