| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2722 |
|---|
| Symbol | |
|---|
| ID | 3704748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 3091585 |
|---|
| End bp | 3093237 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637739204 |
|---|
| Product | paraquat-inducible protein B |
|---|
| Protein accession | YP_344705 |
|---|
| Protein GI | 77166180 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3008] Paraquat-inducible protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACT TGCTGACTGA GGCCAAGATA CGCCCGCCGC GGCGGATAAA GCTCTCGCCA
GTCTGGCTGG TCCCCCTCGC AGCTGCACTG ATCGGCGCGT GGCTGGTGTA TCAGAATATT
GCATCTCAAG GTCCGGAGAT CATATTGCAG CTCGACAACG CCGAAGGTGT GGAAGCTGGT
AAAACAGTGG TTAAACTACA CAATGTGGAT GTGGGACTGG TGGAGAAGGT ACGCTTGTCC
AAGGATTACA CGGGAGCCAT CGCCGAGGTG CGCATGAAGG CGGATATGGA CCCTCTATTG
GTGGAGGATA CCCAATTTTG GGTGGCCAAA CCCCGGGTGG GACGGGAAGG TATTAGCGGC
CTGAGCACAA TCCTCTCTGG CGTCTATATC CAGATGCGCC CAGGCAACGC TCAAGACCCA
GCCCGCCGGT TCCAGGTGCT AGAACGGCCA CCCACGATCC GTATCCACAC CGAGGGATTA
TCGCTGGAGT TAGTCAGTAC GGATGATAAC TCCTTAACCA TCGGAGACCC TGTGGTCTAT
CAAGGCCAGG AAGTGGGTCA GATCGATACC GCAGAATTCA ATGCCTCAGC GCTGGAAATG
CACTACGGCG TATTTATCCG TGCTCCCTTC GATGCGCTGA TCACCGAGAA TGTCCAGTTC
TGGCCACGCT CCGGCATTAT CTTTGAGATC ACTTCCGAGG GATTGCAGGT ACAAACAGGC
ACCCTTGAGA CGATGTTGGC GGGGGGTGTC ACGTTTGGGA TTCCACCGGA TCTGAAGGAT
GGCAAACAAG CTGAACAAGG CGCTATATTT CGACTGTATC CGTCGCGCCA AGCCGCCCAG
CAGGATCGTT ACGACCATCA GTACAAGTAC GTCATTCTGT TCGATGACTC GGTGCGCGGT
TTGTACCCAG GAGCGGCTGT CGAATTCCGT GGCGTCCGGG TAGGCACGGT ACTCAACGTC
CCCTTCTTTG GTGACGACTT TGGTATGGAA TATTCCCAGA CCTTTCGCAT CCCAGTACTG
ATCGCCTTCG AACCGCAGCG GCTGGCAGGC ACTACCTGGG CGCAATTCGA TCAAAAAGCC
TGGCAGCAGC ATCTGAACCG CTTGTTCCCT AGAGGGTTGC GGGCCACTAT AAAGGCGGCT
AATCTGCTCA CGGGCGCAAT GTTTGTGGAT CTCGCTTTCA CGGACCAGAA AGGTGCCCAC
CATGAACCGG CGTTTCAAGG CCAGTATCCG TTGCTCCCCA GCCGCAGCAG CGGGCTGGCC
AGTATCGAGG AAAAGATCAC CCGACTATTG GATAAACTCA ATGAACTGGA ACTCGCGCCA
GTGCTGACTA AGTTGCAACA CACCCTAGAA AGCACTAGCG AAGTCATGAA TAAGTCCCAA
AACACCATGG ATCGGCTGAA CTCACTTCTC GGCAGCGAGG CCATGGGCAA GCTCCCTACT
GAGTTCAATG CAACCCTAGA TGAATTACGG AAGACCCTGA ACAGCTATCA GCAGGGAGCG
CCCGTCTACG ATAAGCTCAA CCGCTCCCTT GACCGGCTGA ATCAGGTTCT GGATGATCTC
GCCCCCTTCG TGGAAACGCT GCACAATGCT CCTTCAGCAC TCTTTTTCGG CGATAATGCC
CCTGAAGACC CTATTCCCCA AGCTGCCAAA TGA
|
|---|
| Protein sequence | MSDLLTEAKI RPPRRIKLSP VWLVPLAAAL IGAWLVYQNI ASQGPEIILQ LDNAEGVEAG
KTVVKLHNVD VGLVEKVRLS KDYTGAIAEV RMKADMDPLL VEDTQFWVAK PRVGREGISG
LSTILSGVYI QMRPGNAQDP ARRFQVLERP PTIRIHTEGL SLELVSTDDN SLTIGDPVVY
QGQEVGQIDT AEFNASALEM HYGVFIRAPF DALITENVQF WPRSGIIFEI TSEGLQVQTG
TLETMLAGGV TFGIPPDLKD GKQAEQGAIF RLYPSRQAAQ QDRYDHQYKY VILFDDSVRG
LYPGAAVEFR GVRVGTVLNV PFFGDDFGME YSQTFRIPVL IAFEPQRLAG TTWAQFDQKA
WQQHLNRLFP RGLRATIKAA NLLTGAMFVD LAFTDQKGAH HEPAFQGQYP LLPSRSSGLA
SIEEKITRLL DKLNELELAP VLTKLQHTLE STSEVMNKSQ NTMDRLNSLL GSEAMGKLPT
EFNATLDELR KTLNSYQQGA PVYDKLNRSL DRLNQVLDDL APFVETLHNA PSALFFGDNA
PEDPIPQAAK
|
|---|
| |