Gene Noc_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2719 
Symbol 
ID3704745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3086121 
End bp3087005 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID637739201 
Productribonuclease BN 
Protein accessionYP_344702 
Protein GI77166177 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGATC TTTCACGCCG AGTCCAATTT ATTCTCGCCC AGCCGCTGTG TTTTCTGTCG 
CGGGTTATTA GCGGATTTCG CGCCAACCAA GGGTTATTAC TGGCGGGGGC CATTGCTTAT
TACGCTTTGT TATCCGTGGT TCCCATGTTT GCGCTGATTT TAGTGGGACT TTCCCAGATC
ATTGACCCAG AGCAGCTGCT GGAGGCCACC CATGACTATC TGGCACTCCT TGCCCCAGGG
CAGGCGGAAA TTCTAACCCA GCAAATTGCA GAGTTCCTAG AAAACTGGAA GTTAATCGGC
GTGGTCGGGT TCCTCGTACT CCTGTTTTTT AGCTCAATGG CGTTTACCGT GCTGGAAAAT
GCCATGTCGG TTATATTTTT TCATCGGGTA GCGATTCATC GGCGCCATTT TTTGGTTTCG
GCAATTTTGC CCTTCTGCTA TTTATTTCTT CTGGGGCTGG GGTTGTTTGT CGTGACGCTC
GTGAGCAGCG CCTTGCATAC TCTGGATGAT CGCACTGTTC CTTTGTTAGG TAACATCTTT
GGCAGTTATT ACGCCATTGG AATTTATATT GTGGGTTTAT TGGGTGAAGT TTTACTGTTG
ACCTCTCTTT ACCTGGTTAT GCCCGTGGGC CGGATTGTAT TCCGTCATGC CTTCATTGGT
GGGATGGTAG CCACGCTGCT ATGGGAACTC ACCCGGCAGG CACTGGTATG GTATTTTTCA
ACCTTATCCT TTGTTAACAT CATCTATGGC TCATTTGCAG CAGTGGTGAT GATTCTATTG
AGCTTGGAAG CAGCAGCGAT TATTGTGCTG TTTGGCGCTC AGGTAATTGC AGAATATGAA
CGTCTGGATA CCCAAGGGGA GAGAAACTCC AGTTTCCAGA CTTAA
 
Protein sequence
MRDLSRRVQF ILAQPLCFLS RVISGFRANQ GLLLAGAIAY YALLSVVPMF ALILVGLSQI 
IDPEQLLEAT HDYLALLAPG QAEILTQQIA EFLENWKLIG VVGFLVLLFF SSMAFTVLEN
AMSVIFFHRV AIHRRHFLVS AILPFCYLFL LGLGLFVVTL VSSALHTLDD RTVPLLGNIF
GSYYAIGIYI VGLLGEVLLL TSLYLVMPVG RIVFRHAFIG GMVATLLWEL TRQALVWYFS
TLSFVNIIYG SFAAVVMILL SLEAAAIIVL FGAQVIAEYE RLDTQGERNS SFQT