Gene Noc_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2715 
Symbol 
ID3704741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3079938 
End bp3080870 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content55% 
IMG OID637739197 
Productzinc metalloprotease 
Protein accessionYP_344698 
Protein GI77166173 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTGGA AGGGCAGACG ACAGAGCGAT AACGTTGAGG ACCGGCGGGG TTCATCCGGG 
CGTGGTTTTG CGGTCGGTGG ACGGGGGGGC GGCGGGCTGA TACGACTGCT GCCGCTAGCC
ATCCGGTTTC TCGGTATTAA AGGAACCTTG CTGGTGGTTC TGGGCGTCGG CGCCTACTTC
TATTTCAGCG GAGGCGAACT TGGCGACCTG TTAGGGGGCA CCCAGGTGAG TCATACTGAG
ACGACGGGTT CTTCCAGTGA AGGTGGTGAG ATACGCCAGT CAGCGGAGGA AGCGGAGCTC
ATGGAGTTTG TATCCGTGGT GCTGGCGGAT ACCGAACTCA CTTGGCACAA TCTGTTTGCA
CAAGCTGGTA AAACCTATAG GGAGCCACGG TTGGTGGTCT ATCGTGGCAT GATCGATTCG
GCGTGTGGTA TGGGCCAGGC AGCGATGGGA CCCTTTTACT GCCCTGGTGA TCACAAGGTG
TATCTTGATT TCAGCTTTTT CGATGAGCTG CGCTCCCGTT ATGGCGTGCC TGGGGATTTT
GCCCAGGCCT ATGTCATTGC GCACGAAATC GGCCACCATG TGCAGACTTT ATTTGGCATC
TCCGCCAGGG TTATGAAGGC TAAACAGGGG CGGAGCAAGG CTGAGGTCAA TAAATTATCC
GTGCTCCAGG AGTTACAGGC TGATTGCTTT GCCGGTATTT GGGGGCACCA TGCCGACAGT
AATCGCCAAT TACTGGAAAA GGGCGATATT GAAGAAGGAT TGAAAGCTGC GAGTGCGATT
GGCGATGATC GTCTGCAGAA GCGGAGTCAA GGCTATATTA CCCCGGAATC TTTTACTCAC
GGGACCTCAG CGCAAAGAGT GCATTGGTTC CGGACCGGCC TGGCGTCTGG TGATGTGTCG
TCTTGTAATA CATTCGGCGC AAACTGGCAG TGA
 
Protein sequence
MRWKGRRQSD NVEDRRGSSG RGFAVGGRGG GGLIRLLPLA IRFLGIKGTL LVVLGVGAYF 
YFSGGELGDL LGGTQVSHTE TTGSSSEGGE IRQSAEEAEL MEFVSVVLAD TELTWHNLFA
QAGKTYREPR LVVYRGMIDS ACGMGQAAMG PFYCPGDHKV YLDFSFFDEL RSRYGVPGDF
AQAYVIAHEI GHHVQTLFGI SARVMKAKQG RSKAEVNKLS VLQELQADCF AGIWGHHADS
NRQLLEKGDI EEGLKAASAI GDDRLQKRSQ GYITPESFTH GTSAQRVHWF RTGLASGDVS
SCNTFGANWQ