| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2682 |
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| Symbol | |
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| ID | 3704438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3037810 |
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| End bp | 3039600 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637739163 |
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| Product | PAS sensor diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_344665 |
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| Protein GI | 77166140 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTG TTAATATTTT TTTCCAGAGC CTCGCCTATT TTCAAAAGAT GATGGGAGGG
CGCAAGGCCC AAGAGGCTTT TTTCTTAGAA CATCAGCGGG CGCAGGTGAC CCTGGAGTCA
ATTGGTGACG CGGTGATTAC CGTTAATTGT AGGGGGCAAG TCGATTATCT CAATCCCTTG
GCCGAAGAGC TGATTGACAC TACCGCGACC CAGGCGCGCG GTAAATCCTT AGAGGAGGTA
GCGTGCCTCC TCAATGAGGA AAGCTATTCT CATGTTATTG GCGATATCGC TACTTGGCTA
GCGGAGGATC CTGTCGAAGG TCGCTCCTGT ACGGCTTTAC TGCGGGACGG ACAGAATCGG
GAATTAATCG TTCAAACATC TATTGCTCCC CTGCGTGATA CCCAGAATCG CATTTTCGGC
GCCGTCTTAG TACTGCGGGA TATTAGTCCT TTGCGGGCGC TGGCAAGCCA GCTCAGTCAT
CAAGCAACTC ATGATGCCTT AACTGGTCTT ATTAACCGGC GTGAGTTTGA AGTTCGGTTG
CGGAAGGCTC TGGATGATGT CCGCCAAAAT GATACTTGCC ATGTTTTATG TTATTTGGAT
TTAGACCAAT TTAAGGTAGT TAATGATACC TGTGGGCATT TAGCCGGCGA TAAGCTGCTT
CGCCAGCTTG CAACCCTGTT GCAGGATAAA ATTCGGGAAT CAGATTGCTT GGCCCGATTG
GGGGGCGACG AGTTTGGCGT GCTTCTGCTA GGGTGCGATT TAGCTCATGC GCGAAAGGTT
GCGGAAAGTT TGCGAATTCT GATTCGTAAT TTTCGTTTTA ACTGTAAGGG GAATACCTTT
CCATTGGGCG CCAGCATCGG TTTGGTTGCC ATTGCGCAAG GAAGCGGCGG ATTGGAAGAA
GTGCTTAGCG CCGCGGATAC TGCCTGCTAT GTTGCTAAGG CTCAGGGGCG TAATCGTATT
CATGTCTACT GCCTGGATGA CCATAGCATT GAACGTCACT ATGGTGAAAT GCAGTGGGTG
ACTCGCATCC AGCAAGCTTT TGAGGGGAGC AGGTTTATGC TTTATCATCA ACCCATCCAT
GCATTAAATG GCGAAGAGCA CATTCGCCAT TGTGAGTTAT TGTTACGTAT GAAAAGCGAG
GATGAAAGTC TTATACCGCC TATGGCTTTT ATTCCGGCCG CGGAACGGTA TCGTTTAATG
CCAGCCTTAG ACCGTTGGGT AATAAGCAAT GCTTTCCTTT CCTTAGGGGA GTGCTCAGTA
GAGCAAGGGC TTATAGGTAT TAATCTTTCC GGGCAATCGA TATCCGATGA ATTATTTTTG
AATTTTGTAA TAGAGCAATT GCATCAGACC TCGGTTAACC CCGAGGTAAT CTGTTTTGAG
ATCACGGAAA CGGCAGCGAT TGCCAATTTT AATGGTGCTA TTCGATTTAT TAGAAAGCTT
AAGGAGATGG GCTGCCGTTT TGCATTGGAT GATTTCGGGA GCGGTTTGTC GTCGTTTAAT
TATCTGAAAA ATTTGCCGGT TGATTACCTA AAAATTGACG GTAGCTTTGT TAAAGAAATG
GTGGATGATC CGGTGGATCA TGCTATGGTG GAGGCCATTC ATAAAGTAGG TAAAGTGATG
GGGTTGAAAA CTATTGCTGA GTTTGTGGAA AATGAAGCCG TTTTTGAAAA ACTCCGCCTC
GTTGGGGTTG ATTATGCCCA AGGCTTTGCC ATCGGCCGCC CTCAGCCATT TTCTAGAATG
TCCATGACGG ATAAAGAGCA GAAAGGGAAA TCTATTATTT TCGTTCGATA A
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| Protein sequence | MSFVNIFFQS LAYFQKMMGG RKAQEAFFLE HQRAQVTLES IGDAVITVNC RGQVDYLNPL
AEELIDTTAT QARGKSLEEV ACLLNEESYS HVIGDIATWL AEDPVEGRSC TALLRDGQNR
ELIVQTSIAP LRDTQNRIFG AVLVLRDISP LRALASQLSH QATHDALTGL INRREFEVRL
RKALDDVRQN DTCHVLCYLD LDQFKVVNDT CGHLAGDKLL RQLATLLQDK IRESDCLARL
GGDEFGVLLL GCDLAHARKV AESLRILIRN FRFNCKGNTF PLGASIGLVA IAQGSGGLEE
VLSAADTACY VAKAQGRNRI HVYCLDDHSI ERHYGEMQWV TRIQQAFEGS RFMLYHQPIH
ALNGEEHIRH CELLLRMKSE DESLIPPMAF IPAAERYRLM PALDRWVISN AFLSLGECSV
EQGLIGINLS GQSISDELFL NFVIEQLHQT SVNPEVICFE ITETAAIANF NGAIRFIRKL
KEMGCRFALD DFGSGLSSFN YLKNLPVDYL KIDGSFVKEM VDDPVDHAMV EAIHKVGKVM
GLKTIAEFVE NEAVFEKLRL VGVDYAQGFA IGRPQPFSRM SMTDKEQKGK SIIFVR
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