Gene Noc_2673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2673 
Symbol 
ID3705170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3029300 
End bp3030061 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content49% 
IMG OID637739154 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_344656 
Protein GI77166131 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGGAGC TATGCACACT TGAAAAATAT CTAACGACAG CAGAGGAATA TTTACGAACT 
GTGCTTGAAA TCATTAAAGC AGGCGGCTGG TTAATGTTAC CGATCCTTGC CTGTTCCATC
GTCGCTATTG GGATTATTAT TGAACGTTTC TGGTTTCTGC GCCGGCAACG GGTCGTACCC
AAGCATATCG CCAGTCAGAT CTGGCAATGG CAATACCGCA ATCAGCTCGA TAAAATCCAT
ATAAAGTCAG TACGAGAAAG CTCTCCCCTA GGCCGAATAC TGGCCGCGGG GCTAGCGAAC
CGAAACCGCT CCCGTGAAAT TATGAAAGAG AGTATCGAAG ATGTGGGCCG CCATGTCACT
CTGGAGCTGG AACGTTTCCT GAATACCTTA GGGACTATTG CAGCTATTAC GCCATTGCTT
GGATTGCTAG GGACCGTCAT TGGGATGATC AAAGTCTTTA CCGTCATTAC TGCCCAAGGC
GTCGATAACC CGGCAGTGCT AGCAGGTGGA ATCTCCGAGG CCCTTATCAC GACAGCGGCG
GGCCTTGCGG TCGCCATCCC CAGCCTGATG TTTTACCGCT ATTTTCACGG TAGAGTTATG
AGGTTGGTAG TAGACATGGA AGAACAAGCC ATTAAACTAG TGGAAGTCAT GCATGGGGAT
CGGGAACTTG ACCCGACTGA AAACCTGGCT GCACGAGTCT CCATTGAATC TTCTTTGAAA
TCTGACGTGG AACATCATGA ATATACACCC GGCCCGGTAT AA
 
Protein sequence
MTELCTLEKY LTTAEEYLRT VLEIIKAGGW LMLPILACSI VAIGIIIERF WFLRRQRVVP 
KHIASQIWQW QYRNQLDKIH IKSVRESSPL GRILAAGLAN RNRSREIMKE SIEDVGRHVT
LELERFLNTL GTIAAITPLL GLLGTVIGMI KVFTVITAQG VDNPAVLAGG ISEALITTAA
GLAVAIPSLM FYRYFHGRVM RLVVDMEEQA IKLVEVMHGD RELDPTENLA ARVSIESSLK
SDVEHHEYTP GPV