Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2667 |
Symbol | |
ID | 3705164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3023223 |
End bp | 3023885 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637739148 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_344650 |
Protein GI | 77166125 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCCG ATGAAATGAA AAAGCTGGCC GCTAAAGCTG CCCTTGAGCA TGTAGAACCA GGTACTATCG TTGGTACGGG CACAGGCTCT ACCGTTAACC ATTTTATTGA TCTGCTGGGA ACAATTAAAG GCAAGATCGA GGGTGCCGTC TCCAGTTCCG AGGCTTCCAC CGCACGGCTT AAAGCTCTCA ATATTCCCGT TTACGAGCTA AATGCGGTAG GAGAAATTCC CCTCTATATT GATGGCGCCG ACGAGTCTAA TCATTATCTG CAGCTCATTA AAGGGGGAGG CGGGGCACTA ACCCGGGAGA AAATCATTGC CGCTGCCAGC AAGAAATTTG TCTGTATTGC AGATCAGTCA AAGCTCGTTG ATATATTGGG CACCTTCCCA CTCCCCGTGG AAGTCATCCC TATGGCGCGC AGCTATGTGG CGCGGCAAAT CGTTAAGCTT GGTGGAGAGC CCGTTTACCG GGAAGGTTTT ATCACCGATA ATGGTAATCA AATTCTGGAT ACCCACGGGC TTTCCATTAT GGAGCCTGCT AAACTGGAAG GACAGCTCAA TAATATCCCC GGTGTAGTCA CTAACGGTCT GTTCGCCATA TATCCCGCGG ACGTGCTTAT CCTCGGTTCT CCAGAGGGCG TCAAAACCAT TTACCCTAAA TAA
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Protein sequence | MSPDEMKKLA AKAALEHVEP GTIVGTGTGS TVNHFIDLLG TIKGKIEGAV SSSEASTARL KALNIPVYEL NAVGEIPLYI DGADESNHYL QLIKGGGGAL TREKIIAAAS KKFVCIADQS KLVDILGTFP LPVEVIPMAR SYVARQIVKL GGEPVYREGF ITDNGNQILD THGLSIMEPA KLEGQLNNIP GVVTNGLFAI YPADVLILGS PEGVKTIYPK
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