Gene Noc_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2644 
Symbol 
ID3704398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2997564 
End bp2998517 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID637739125 
ProductABC transporter, ATPase subunit 
Protein accessionYP_344627 
Protein GI77166102 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG ATATTCTAAT ACGCGCGGAA CAACTATACC GATATTACAG TGGGCACTGC 
GCTGTTAAAA ACGTTAGCTT CGATGTTCGG AGGGGCGAGA TATTGGGCTT TCTCGGTCCT
AACGGTGCCG GGAAAACAAC TACCATGCAA ATCTTAGCAG GCAGCTTAGC GCCAAGTTCC
GGGCAAGTGC GGATCAATGA TTTCGACTTG TTAGATAAAC CCAAGCAGGC CAAACAAGGT
CTCGGCTACT TACCCGAAAC TCCCCCGCTT TATCGGGAAC TTACTGTGAC GGAATATCTT
GCTTTCTGCG CCCGCCTCAA CCGTATACCC AGAAACCAGC AGGCAGGCGC CATTGCCTCG
GCTATCAATC GCTGCGGTTT AAAAAAAGTA AGCAAACGGC TGATTGGAAA TCTTTCCAAG
GGCTACCAGC AGCGAGTAGG AATTGCGCAA GCTATCATTC ATTCTCCCTC TGTGATTATC
CTGGATGAGC CTACAGTAGG TTTAGATCCC ATCCAAATTC GAGAGATTCG CGAACTTATT
CGTGAGCTGG CCCAAAAACA TAGCGTCATC CTTTCCACCC ACATCCTGCC GGAAGTTCAG
GCTATCTGTG ATCGGGTCCA GATTATTAAC CAGGGAGAAT TAGTGCTTAC CGATACCATC
GCGGGGCTCA GCCAGCGGAT GGAGGCCACC AGTATCTTGG TAAGGTTTGA CGCCCCCCCC
ACAACCGAGG CGCTAATGTC TATAAAGGGC GTGACAAGTG TAGAAAGAGA GGAAGACGGA
CGATTCCGTC TTCGTTATCA ACCTGATAAG CAAGATCCAG TGGAAGAACT GGTTCGCCGC
ACCGTTGATA AAGGCTGGCA TCTGCGGGAA CTCACTCCGG AGCGGCGCAC CCTAGAAGAA
ATTTTCGTCG CCATTACCCA GACGGAAACT TCCCAGGAGC CGGTGCTACT ATGA
 
Protein sequence
MTQDILIRAE QLYRYYSGHC AVKNVSFDVR RGEILGFLGP NGAGKTTTMQ ILAGSLAPSS 
GQVRINDFDL LDKPKQAKQG LGYLPETPPL YRELTVTEYL AFCARLNRIP RNQQAGAIAS
AINRCGLKKV SKRLIGNLSK GYQQRVGIAQ AIIHSPSVII LDEPTVGLDP IQIREIRELI
RELAQKHSVI LSTHILPEVQ AICDRVQIIN QGELVLTDTI AGLSQRMEAT SILVRFDAPP
TTEALMSIKG VTSVEREEDG RFRLRYQPDK QDPVEELVRR TVDKGWHLRE LTPERRTLEE
IFVAITQTET SQEPVLL