Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2644 |
Symbol | |
ID | 3704398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2997564 |
End bp | 2998517 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637739125 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_344627 |
Protein GI | 77166102 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAAG ATATTCTAAT ACGCGCGGAA CAACTATACC GATATTACAG TGGGCACTGC GCTGTTAAAA ACGTTAGCTT CGATGTTCGG AGGGGCGAGA TATTGGGCTT TCTCGGTCCT AACGGTGCCG GGAAAACAAC TACCATGCAA ATCTTAGCAG GCAGCTTAGC GCCAAGTTCC GGGCAAGTGC GGATCAATGA TTTCGACTTG TTAGATAAAC CCAAGCAGGC CAAACAAGGT CTCGGCTACT TACCCGAAAC TCCCCCGCTT TATCGGGAAC TTACTGTGAC GGAATATCTT GCTTTCTGCG CCCGCCTCAA CCGTATACCC AGAAACCAGC AGGCAGGCGC CATTGCCTCG GCTATCAATC GCTGCGGTTT AAAAAAAGTA AGCAAACGGC TGATTGGAAA TCTTTCCAAG GGCTACCAGC AGCGAGTAGG AATTGCGCAA GCTATCATTC ATTCTCCCTC TGTGATTATC CTGGATGAGC CTACAGTAGG TTTAGATCCC ATCCAAATTC GAGAGATTCG CGAACTTATT CGTGAGCTGG CCCAAAAACA TAGCGTCATC CTTTCCACCC ACATCCTGCC GGAAGTTCAG GCTATCTGTG ATCGGGTCCA GATTATTAAC CAGGGAGAAT TAGTGCTTAC CGATACCATC GCGGGGCTCA GCCAGCGGAT GGAGGCCACC AGTATCTTGG TAAGGTTTGA CGCCCCCCCC ACAACCGAGG CGCTAATGTC TATAAAGGGC GTGACAAGTG TAGAAAGAGA GGAAGACGGA CGATTCCGTC TTCGTTATCA ACCTGATAAG CAAGATCCAG TGGAAGAACT GGTTCGCCGC ACCGTTGATA AAGGCTGGCA TCTGCGGGAA CTCACTCCGG AGCGGCGCAC CCTAGAAGAA ATTTTCGTCG CCATTACCCA GACGGAAACT TCCCAGGAGC CGGTGCTACT ATGA
|
Protein sequence | MTQDILIRAE QLYRYYSGHC AVKNVSFDVR RGEILGFLGP NGAGKTTTMQ ILAGSLAPSS GQVRINDFDL LDKPKQAKQG LGYLPETPPL YRELTVTEYL AFCARLNRIP RNQQAGAIAS AINRCGLKKV SKRLIGNLSK GYQQRVGIAQ AIIHSPSVII LDEPTVGLDP IQIREIRELI RELAQKHSVI LSTHILPEVQ AICDRVQIIN QGELVLTDTI AGLSQRMEAT SILVRFDAPP TTEALMSIKG VTSVEREEDG RFRLRYQPDK QDPVEELVRR TVDKGWHLRE LTPERRTLEE IFVAITQTET SQEPVLL
|
| |