| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2638 |
|---|
| Symbol | |
|---|
| ID | 3704392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2992933 |
|---|
| End bp | 2993943 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637739119 |
|---|
| Product | UDP-glucuronate 5'-epimerase |
|---|
| Protein accession | YP_344621 |
|---|
| Protein GI | 77166096 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TGGTGACGGG AAGCGCCGGC TTTATCGGCG CGGCATTGAC CGAGAAACTG
CTAAAGCGCG GCGATGAGGT CATTGGCGTT GATAATCTCA ATGATTATTA CGATGTCAAT
CTGAAACGGG CCCGGCTGGC CCGCTTTCAA ACTAACCCCG CCTTTACCGA AGTGCCTATT
GGGCTGGAGA ATCGCGAAGC TTTGCGGGCT ATATTTGCTA AATATCGGCC CCAACGGGTA
GTTAATCTAG CGGCTCAAGC TGGCGTTCGT TACTCCCTGG AAAACCCCTA TGCCTATATG
GATAGCAATC TATATGGCTT CCTGAACATC CTAGAGAACT GCCGCCATTA CCAGGTAGAA
CACCTCGTTT TTGCCTCCAG CAGCTCCGTT TATGGCGCTA ACACTAAAAT GCCCTACGCA
GTCCAAGATA ATGTGGATCA TCCCTTGAGT TTGTACGCGG CTTCGAAAAA GGCTAATGAA
TTAATGGCCC ATACTTATAG CCACCTTTAT CGGCTTCCAA CGACCGGATT GCGTTTTTTC
ACCGTCTATG GCCCTTGGGG ACGGCCGGAC ATGGCTCTCT TTAAGTTTAC CCGTAATATC
CTGGCGGGTA AACCTATCGA GGTCTATAAT TACGGCCATC ATCAACGGGA CTTTACCTAT
ATTGACGATA TCGTAGAGGG AGTGACTCGT ACCCTAGATC GGCTTCCGGC ACCTAACGCC
AACTGGAATG GGGCAACCCC TGAGCCAAAT ACGAGCTCCG CACCCTACCG AATTTACAAT
ATAGGCAATC ATCAGCCTGT AGAACTCGGT AAGTTTATCA AGATATTAGA AGAATGCCTG
GGCCGCGAAG CAAAAAAGAA TTTACTTCCC CTACAGCCTG GGGATGTCCC TGCCACCTAC
GCGGATGTGG ATGATTTAAT CCAGGACATG GAGTTCTACC CTGCTACACC TATCGAGGAG
GGGATCGCCC GCTTCGTAGC CTGGTATAAA AATTACCATA AGGTAAGATA A
|
|---|
| Protein sequence | MKIMVTGSAG FIGAALTEKL LKRGDEVIGV DNLNDYYDVN LKRARLARFQ TNPAFTEVPI
GLENREALRA IFAKYRPQRV VNLAAQAGVR YSLENPYAYM DSNLYGFLNI LENCRHYQVE
HLVFASSSSV YGANTKMPYA VQDNVDHPLS LYAASKKANE LMAHTYSHLY RLPTTGLRFF
TVYGPWGRPD MALFKFTRNI LAGKPIEVYN YGHHQRDFTY IDDIVEGVTR TLDRLPAPNA
NWNGATPEPN TSSAPYRIYN IGNHQPVELG KFIKILEECL GREAKKNLLP LQPGDVPATY
ADVDDLIQDM EFYPATPIEE GIARFVAWYK NYHKVR
|
|---|
| |