Gene Noc_2636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2636 
SymbolgatA 
ID3704390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2990033 
End bp2991484 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content52% 
IMG OID637739117 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_344619 
Protein GI77166094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCATA AGTCCTTAGC CGAACTGGCC AGCGCCCTAA AAGCGCGCGA ATTTTCAAGC 
GAAGAACTCA CCCAGCACTA TCTCAAACGT ATTGAGCGGC TGAATGAAGA TCTCAACAGC
TTTATTACCG TCTCTACTGA AGAGGCCCTT AAACAGGCTA AAGCCGCTGA TGCCATATTA
CAATCCGGGG AAGGAAGCTC GATAACGGGT ATCCCTTTAG CCCACAAGGA TATTTTTTGT
ACTACCGGGG TTAAAACAAG CTGTGGCTCA AAAATGCTCG ACAACTTTAC CGCGCCCTAT
AATGCTACCG TAGTCTCCCG CCTCAAAACC GCCGGTGCTG TCATGCTTGG CAAGACCAAC
ATGGACGAAT TTGCCATGGG CTCCAGCAAT GAGACTAGTT TCTATGGTTC GGTGAAAAAT
CCCTGGGCTC ACGACCGGGT TCCCGGCGGT TCCTCGGGGG GATCGGCTGC GGCAGTAGCT
GCAAGGCTGA CTCCTGCCGC TACTGGGACA GATACTGGCG GCTCTATCCG TCAGCCGGCG
GCTTTATGCG GAATTACTGG GCTAAAACCC ACTTATGGCC GGGTTTCCCG GTACGGAATG
ATCGCTTTCG CCTCCAGCCT CGACCAGGGT GGCCCTATGG CCCGCACTGC CCAGGATGCA
GCCCTTTTGC TTAATGTTAT GGCTGGTTTT GACGAGCGGG ACTCCACCTC TGTAGCGCAA
GATGTTCCCG ACTACACCCT TTCTCTTGAA GAGAGCATCA AAGGGATTAA AATCGGTCTA
CCCACAGAAT ATTTCGACGA AAACCTGAAC CCGGGTATCG CCATCCCCAT TGAGGCCGCT
ATCAAAGAAT TTGAACGCCT CGGCGCTCAG ATCCGTGAAA TCAGCTTGCC CAATACTAAG
CTGGCGGTCC CTACCTATTA TGTGGTTGCC CCAGCAGAGT GTTCTTCTAA CCTTTCCCGC
TATGATGGCA CTCGTTTTGG TTACCGTTGC GACAACCCCA AAGATCTCCT AGAGCTTTAT
TGTCGCTCTC GAGGCGAAGG CTTTGGCCCT GAAGTCAAGC GCCGGATTTT GATAGGCACT
TATGTGCTCT CGGCAGGCTA TTACGATGCC TATTATCTCA AAGCCCAGAA ATTACGGCGT
CTTATTAGCG ATGATTTTAA ACAAGCCCTT ACTGAAGTGG ATGTCATTAT GGGCCCCACT
TCGCCAACAC CCGCTTTTCG GCTCGGAGAG AAAAGCGACG ACCCGGTTGC TATGTACTTA
GCTGATATTT ATACCATCAA CGTTAACCTG GCCGGATTGC CCGCACTTTC CATTCCGGCA
GGCTTTGCCC AAGGGCTGCC CGTCGGCCTA CAAATCATTG GTAATTATTT CAGCGAATCG
CGCCTCCTCA ACCTTGCCCA CCGCTACCAA CAAGTCACAG ACTGGCATGA CCGCATTCCT
GCAGGTTATT AA
 
Protein sequence
MHHKSLAELA SALKAREFSS EELTQHYLKR IERLNEDLNS FITVSTEEAL KQAKAADAIL 
QSGEGSSITG IPLAHKDIFC TTGVKTSCGS KMLDNFTAPY NATVVSRLKT AGAVMLGKTN
MDEFAMGSSN ETSFYGSVKN PWAHDRVPGG SSGGSAAAVA ARLTPAATGT DTGGSIRQPA
ALCGITGLKP TYGRVSRYGM IAFASSLDQG GPMARTAQDA ALLLNVMAGF DERDSTSVAQ
DVPDYTLSLE ESIKGIKIGL PTEYFDENLN PGIAIPIEAA IKEFERLGAQ IREISLPNTK
LAVPTYYVVA PAECSSNLSR YDGTRFGYRC DNPKDLLELY CRSRGEGFGP EVKRRILIGT
YVLSAGYYDA YYLKAQKLRR LISDDFKQAL TEVDVIMGPT SPTPAFRLGE KSDDPVAMYL
ADIYTINVNL AGLPALSIPA GFAQGLPVGL QIIGNYFSES RLLNLAHRYQ QVTDWHDRIP
AGY