Gene Noc_2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2627 
Symbol 
ID3704518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2981254 
End bp2982261 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content53% 
IMG OID637739108 
Producthypothetical protein 
Protein accessionYP_344610 
Protein GI77166085 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACGC AATCATCCCA TCTTCTGCAG AAACCCGTTT GGCAAGCAGC ACTCTCCCAG 
GCTGTGCGCA ACCCCCAAGA ACTACTTGAA CTAACGGGCT TGGATAACCA TCCCCAAATT
GCCAGTGAGG CTACTCGCCG GCAATTTCCC CTGCGGGTAC CCCGCAGTTA CATCGCCCGT
ATGAAAAAAG GTGATCCTAA CGATCCCCTG TTCCGGCAAG TTTTTCCTCT GCACGCTGAA
GATCAAATTT CACCCGGTTT TAACACTGAT CCTGTAGGGG ATTTGGCGGC GATGCCTGCG
CCGGGCGTTC TCCAGAAATA TACTGGAAGA GTACTTTTAG TCGCCACAGG GGCCTGTGCC
ATCCACTGCC GTTATTGCTT TCGCCGTCAT TTCCCTTACG GAGACCATAA TCCGGCCCAA
GAACATTGGA AGCGAGCACT GCAATATATT GCCCAGAACC AGAGCATTCG GGAGGTCATT
TTGAGCGGCG GTGATCCCTT AACCCTCGCT GATAACCGCC TAGCCGAACT GGCCCAAACG
CTAGCCACTA TTTCCCATGT TAAGCGACTA CGCATTCACA CCCGCCTACC CGTGGTATTA
CCAGAACGGG TAGACCACCA TTTGCTTCAG TGGCTTGAGG GGACTTCCCT TCAGAAAGTA
GTGGTTATCC ATGCTAATCA CGTTAACGAA CTTGACGATA GGGTAGCCGC TGCGCTTAAC
GACCTTTCCC GTGCGGGGTG CCGGCTTTTC AATCAGACCG TGCTGTTACG AGGGATTAAT
GATAAGGTCA GCGCCCTGAG TGATTTGAGC GAAGGCTTGT TCGATACAGG CGTACTCCCT
TATTACCTCC ATCTATTGGA CAAAGTCCAA GGGGCAGCTC ATTTTGAAGT GGATATCATT
ACCGCCCAGC GCTTGCATCG AACCCTACGG GCCCGCCTGC CTGGCTATTT AGTGCCCCTG
CTGGTCCAAG AACAAGCCGG CGCCCCGAGT AAACTGCCCC GGAGCTAA
 
Protein sequence
MITQSSHLLQ KPVWQAALSQ AVRNPQELLE LTGLDNHPQI ASEATRRQFP LRVPRSYIAR 
MKKGDPNDPL FRQVFPLHAE DQISPGFNTD PVGDLAAMPA PGVLQKYTGR VLLVATGACA
IHCRYCFRRH FPYGDHNPAQ EHWKRALQYI AQNQSIREVI LSGGDPLTLA DNRLAELAQT
LATISHVKRL RIHTRLPVVL PERVDHHLLQ WLEGTSLQKV VVIHANHVNE LDDRVAAALN
DLSRAGCRLF NQTVLLRGIN DKVSALSDLS EGLFDTGVLP YYLHLLDKVQ GAAHFEVDII
TAQRLHRTLR ARLPGYLVPL LVQEQAGAPS KLPRS