Gene Noc_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2626 
Symbol 
ID3704517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2980652 
End bp2981221 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content50% 
IMG OID637739107 
Productelongation factor P 
Protein accessionYP_344609 
Protein GI77166084 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCT ATAGTACCAG CGAATTTAAA TCCGGTCTCA AGGTAATGAT GGATGGAGAT 
CCCTATACCA TCATGGAAAA TGAATTTGTT AAGCCCGGTA AGGGGCAAGC TTTCAATCGG
GTAAAGCTGC GCAATTTGAA AACTGGCCGG GTGATTGACC GCACCTTTAA ATCCGGTGAT
TCCTTGGAAG CGGCGGATGT AATCGAGACC CAATTACAGT ACCTTTATTC AGATGGCGAG
TTTTGGCATC TTATGTCGCC AGAAACTTAT GAGCAGTATT CAGCCGATGC CGCCGCTGTT
GGAGATTCGA CCAAGTGGCT TAAGGAGCAA GATACTTGTA CCGTTACTCT GTGGAATGGG
GCCCCCCTTT TGGTATCACC GCCTAATTTC GTCACCCTTA AGGTGACCGA AACCGATCCA
GGCATTCGTG GCGATACCTC GGGGGGGGGC AGCAAGCCAG CTACCTTAGA GACGGGCGCG
GTGGTTCGAG TTCCTTTATT CATTGATGTA GGTGAAATGC TTAAGATCGA TACCCGCACT
GGCGAGTATG TGGAACGAGC CAAGGAATGA
 
Protein sequence
MAGYSTSEFK SGLKVMMDGD PYTIMENEFV KPGKGQAFNR VKLRNLKTGR VIDRTFKSGD 
SLEAADVIET QLQYLYSDGE FWHLMSPETY EQYSADAAAV GDSTKWLKEQ DTCTVTLWNG
APLLVSPPNF VTLKVTETDP GIRGDTSGGG SKPATLETGA VVRVPLFIDV GEMLKIDTRT
GEYVERAKE