Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2625 |
Symbol | |
ID | 3704516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2979604 |
End bp | 2980674 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637739106 |
Product | lysyl-tRNA synthetase-related protein |
Protein accession | YP_344608 |
Protein GI | 77166083 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAACG AGCCAAGGAA TGAGCGGGAA ACATTTCTTT CTGGTTGTTA TTCTTCGGTA TTATTGGCCA ACATGGTTAA AACAGAGGCT CCCTGGCGCC CCCAGGCTGA TAAAAAGGCA TTGGAGGCCA GGGCTCAGCT TCTGGCTGAC ATTCGCCATT TCTTCGCGCG ACGTGGAGTC TTAGAGGTAG AAACCCCCAT ACTTTCCACC GCGGCGGCAA CCGCCCCTCA CCTCCATAGT CTGGTGACCA CCTATCAGGG GCCTCAGGCC CCTAAAGAAG GCCAGCAGCT TTTTTTGCAG ACTTCCCCCG AACATGCCAT GAAACGCCTG TTGGCGGCAG GGAGTGGTCC AATTTACCAG ATTGCACGGG TTTTTCGCAA TGGGGAGAGC GGGCGGCGGC ACAATCCCGA ATTTACCCTG CTGGAATGGT ATCGGCCCGG CTTTGACCAC TTAGCCCTGA TGGAAGAAGT GGATATTCTG CTATCCCTGC TTTTGGGGAC CTCCGCGGGG GAACGTCTTA GCTATAGGGA AGTTTTTCAC CGTTATTTAG GGATAGATGT TTTTACCGCC AGTGATAAGA CCCTGGCTCG GCTTGCAAAT GTTCAAGGTT TTCACGATGT GGCGGCCAGT GGGGGGCAAG CGCGGCAAAT CTATCTGGAT TTTTTGCTGG CTAACGTTAT TGAACCTCAG CTGGGACAAG AGCGGCCTTG CTTTATTTAC GACTATCCCG CCTCCGATGC CCAACTGGCC CGTATTCGTC CCCCATCGGA GAGCTGTTCT AGACCCCTGG CTGAGCGCTT TGAGGTTTAC CTCAAAGGCA TGGAGCTGGC CAATGGTTAC CATGAGCTAT GTGATGCAGT GGAACAGCGG CAACGTTTTG GAGCAGATCT AATCCAACGA AAAAGAGGAG GGCTTTCAGA AGTTCCCATG GATAAGTTTT TGTTGGCTGC CTTGGAGCAA GGACTGCCAG CGTGCGCCGG GGTGGCGCTG GGGGTAGATC GGTTACTCAT GCTGCTGCTA AATAGCGCCC GTATCGAGGA AGTTTTGGCA TTTCCTCTTA TACGAATTTA A
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Protein sequence | MWNEPRNERE TFLSGCYSSV LLANMVKTEA PWRPQADKKA LEARAQLLAD IRHFFARRGV LEVETPILST AAATAPHLHS LVTTYQGPQA PKEGQQLFLQ TSPEHAMKRL LAAGSGPIYQ IARVFRNGES GRRHNPEFTL LEWYRPGFDH LALMEEVDIL LSLLLGTSAG ERLSYREVFH RYLGIDVFTA SDKTLARLAN VQGFHDVAAS GGQARQIYLD FLLANVIEPQ LGQERPCFIY DYPASDAQLA RIRPPSESCS RPLAERFEVY LKGMELANGY HELCDAVEQR QRFGADLIQR KRGGLSEVPM DKFLLAALEQ GLPACAGVAL GVDRLLMLLL NSARIEEVLA FPLIRI
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