Gene Noc_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2625 
Symbol 
ID3704516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2979604 
End bp2980674 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content53% 
IMG OID637739106 
Productlysyl-tRNA synthetase-related protein 
Protein accessionYP_344608 
Protein GI77166083 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00462] lysyl-tRNA synthetase-like protein GenX 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAACG AGCCAAGGAA TGAGCGGGAA ACATTTCTTT CTGGTTGTTA TTCTTCGGTA 
TTATTGGCCA ACATGGTTAA AACAGAGGCT CCCTGGCGCC CCCAGGCTGA TAAAAAGGCA
TTGGAGGCCA GGGCTCAGCT TCTGGCTGAC ATTCGCCATT TCTTCGCGCG ACGTGGAGTC
TTAGAGGTAG AAACCCCCAT ACTTTCCACC GCGGCGGCAA CCGCCCCTCA CCTCCATAGT
CTGGTGACCA CCTATCAGGG GCCTCAGGCC CCTAAAGAAG GCCAGCAGCT TTTTTTGCAG
ACTTCCCCCG AACATGCCAT GAAACGCCTG TTGGCGGCAG GGAGTGGTCC AATTTACCAG
ATTGCACGGG TTTTTCGCAA TGGGGAGAGC GGGCGGCGGC ACAATCCCGA ATTTACCCTG
CTGGAATGGT ATCGGCCCGG CTTTGACCAC TTAGCCCTGA TGGAAGAAGT GGATATTCTG
CTATCCCTGC TTTTGGGGAC CTCCGCGGGG GAACGTCTTA GCTATAGGGA AGTTTTTCAC
CGTTATTTAG GGATAGATGT TTTTACCGCC AGTGATAAGA CCCTGGCTCG GCTTGCAAAT
GTTCAAGGTT TTCACGATGT GGCGGCCAGT GGGGGGCAAG CGCGGCAAAT CTATCTGGAT
TTTTTGCTGG CTAACGTTAT TGAACCTCAG CTGGGACAAG AGCGGCCTTG CTTTATTTAC
GACTATCCCG CCTCCGATGC CCAACTGGCC CGTATTCGTC CCCCATCGGA GAGCTGTTCT
AGACCCCTGG CTGAGCGCTT TGAGGTTTAC CTCAAAGGCA TGGAGCTGGC CAATGGTTAC
CATGAGCTAT GTGATGCAGT GGAACAGCGG CAACGTTTTG GAGCAGATCT AATCCAACGA
AAAAGAGGAG GGCTTTCAGA AGTTCCCATG GATAAGTTTT TGTTGGCTGC CTTGGAGCAA
GGACTGCCAG CGTGCGCCGG GGTGGCGCTG GGGGTAGATC GGTTACTCAT GCTGCTGCTA
AATAGCGCCC GTATCGAGGA AGTTTTGGCA TTTCCTCTTA TACGAATTTA A
 
Protein sequence
MWNEPRNERE TFLSGCYSSV LLANMVKTEA PWRPQADKKA LEARAQLLAD IRHFFARRGV 
LEVETPILST AAATAPHLHS LVTTYQGPQA PKEGQQLFLQ TSPEHAMKRL LAAGSGPIYQ
IARVFRNGES GRRHNPEFTL LEWYRPGFDH LALMEEVDIL LSLLLGTSAG ERLSYREVFH
RYLGIDVFTA SDKTLARLAN VQGFHDVAAS GGQARQIYLD FLLANVIEPQ LGQERPCFIY
DYPASDAQLA RIRPPSESCS RPLAERFEVY LKGMELANGY HELCDAVEQR QRFGADLIQR
KRGGLSEVPM DKFLLAALEQ GLPACAGVAL GVDRLLMLLL NSARIEEVLA FPLIRI