Gene Noc_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2613 
Symbol 
ID3704368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2968061 
End bp2969569 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content54% 
IMG OID637739094 
Productbifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 
Protein accessionYP_344596 
Protein GI77166071 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0100846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCAGTA ATAATTTAGC AAGCTTGAGA TTTAGCCGGT ACCCCCTCTA TGGTAATATG 
AGCCAATTTT TAGCAACCCT CCCTGGCATG ACCCACGGCT TACCTCACTT TACTAGCGCT
CAAGTGCTAG TCATCGGCGA TGTAATACTG GATCGCTACT GGCACGGTAC TACTTCGCGC
ATTTCACCGG AAGCTCCCGT GCCCGTAGTA CAGGTAACGG GGCGGGAAGA TCGGCCTGGT
GGAGCAGGCA ATGTTGCAGT CAATGTCGCG GCGCTCGGAG CGGAGGTGAC GCTGCTAGGA
TTGATCGGCG CTGATGAGGC CGCGGCTGCG CTACGGTCCT TACTGGCTCA CCGGGGAGTC
CACTGTTGCT TGGAAGGGCT GCCTAATATT GCCACCCTTA CCAAGCTGCG TGTCATCAGC
CGCCACCAAC AATTGATTCG ACTAGATTTT GAAGATGACT TTATTCCTGC CCACGGCGAG
GCACTGCTCC CTGCCTATAG CACCGCTTTG AGGGGTAAAT CGGTCGTGAT CCTTTCCGAT
TACGGCAAAG GCACACTTCA AGAACCGCAA CGGCTCATCG CTCTTGGCCG GGAAGTCGGA
GTGCCAATCC TAATTGACCC CAAAGGCGCT GATTTTTCCC ACTACCACGG TGCCACTATC
ATCACCCCCA ACCTAGCTGA ATTTGAAATG GTAGTAGGGC CCTGCCCTGA TGAAGCGTCC
CTGGTTTGGA AAGGGGAGCA ATTACGACAA CAACTCGCAC TTAAAGCGCT GCTCATTACC
CGCGGTGAAC AGGGCATGAC CTTGCTGGAG CAAGGACACT CCCCTGTTCA TCTGCCCACC
GAGGCACGAG AGGTCTTCGA TGTGACCGGG GCTGGAGACA CCGTAATCTC TGTCCTGGGC
GCCGCGCTAG CTGCCGGCGG TACCTTCAAG GAAGCTACCC TCCTTGCCAA TCAAGCAGCA
GGGATCGTCG TGGGTAAACT GGGTACGGCC AGCGTCACCC GTGATGAACT TCAACAGGCG
CTGCATCCTA GGGCGATCCG CCGGGGAATC ACTAGTGAGG AAGAACTGCT GCATTTTATT
AACCTAGCTC GCAGCCGTGG GGAATGTATT GTAATGACCA ATGGCTGTTT TGATATTCTT
CATCCCGGCC ATGTAAACTA TTTAGCCGAA GCGCGCCAAT TGGGAGATCG CCTGATTGTG
GCTGTCAATG ATGATGCCTC AGTTCAACGT CTCAAGGGTA AAAATCGACC CATCAATTCT
CTGGCTCAAC GCCTGACAGT TTTGGCAGCG CTCCATGACG TGGACTGGGT AGTCCCTTTC
TCGGAGGATA CCCCAGCACG GCTTATTGAG CGAGTTCTAC CGGATATTTT GGTGAAAGGC
GGTGATTACA CCCCCGAACA AATAGCCGGG GCCAATGCCG TGGTTGCTAA TGGCGGAAAA
ATCATTATCC TCACCTATCA ACAGGGTTGT TCCACCAGCC AAATCATTGA TATTATTCGT
AAAAATTAG
 
Protein sequence
MGSNNLASLR FSRYPLYGNM SQFLATLPGM THGLPHFTSA QVLVIGDVIL DRYWHGTTSR 
ISPEAPVPVV QVTGREDRPG GAGNVAVNVA ALGAEVTLLG LIGADEAAAA LRSLLAHRGV
HCCLEGLPNI ATLTKLRVIS RHQQLIRLDF EDDFIPAHGE ALLPAYSTAL RGKSVVILSD
YGKGTLQEPQ RLIALGREVG VPILIDPKGA DFSHYHGATI ITPNLAEFEM VVGPCPDEAS
LVWKGEQLRQ QLALKALLIT RGEQGMTLLE QGHSPVHLPT EAREVFDVTG AGDTVISVLG
AALAAGGTFK EATLLANQAA GIVVGKLGTA SVTRDELQQA LHPRAIRRGI TSEEELLHFI
NLARSRGECI VMTNGCFDIL HPGHVNYLAE ARQLGDRLIV AVNDDASVQR LKGKNRPINS
LAQRLTVLAA LHDVDWVVPF SEDTPARLIE RVLPDILVKG GDYTPEQIAG ANAVVANGGK
IIILTYQQGC STSQIIDIIR KN