| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2605 |
|---|
| Symbol | |
|---|
| ID | 3704360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2958648 |
|---|
| End bp | 2960132 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637739086 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_344588 |
|---|
| Protein GI | 77166063 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000129908 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT CATCCCCATT GCCCCTCACC CACAAAGCGC AGGTAGAGGT ACGCCAAACG
CGCTTGCTGA TTGATGGCAA ATTTTGCGAC AGCCTCAGCG GTAAGACCTT TGCCACCATC
GATCCCGCTA CTGAAGAAGT CATTGCCCAG GTGGCGGAGG GCGATGCGGA AGATATTGAC
CTGGCGGTTC AAGCAGCCCG CAAAGCTTTC GATAGCGGCC CCTGGCATCG GATGGACGCA
CGGGAACGGG GCCGCCGAAT GTTGAAGTGG GCCGATTTGA TTGAAGCTCA TATGGAAGAG
CTAGCTAAAC TTGAAGTCTT GGACAATGGG AAACCCATCA ACGAGGCCCT AGGCTACGAT
ATTCCCAGCG CCGCGGCTAC GCTTCGTTAT TTTGCCGGCT GGGCGGATAA AATCCATGGT
AAAACCATTC CTATTTCCGG GCCTTTCTTC ACTTATACGC GCCGGGAGCC GGTGGGGGTT
TGCGGGCTCA TCATTCCCTG GAATTTTCCT CTGGCAATGG CGGCTTGGAA GTTAGGCCCT
GCCCTAGCCA CCGGCTGCAC CGCTATTCTA AAGCCGGCGG AACAAACTCC CCTGACGGCC
CTTCGTGCCG GTGAGTTGGC CCTGGAGGCA GGTATTCCCC CGGGAGTCCT CAATATCGTG
CCCGGTTTTG GCCCTACGGC GGGCGCAGCC CTGGTACAGC ACCCTCTGGT TGAGAAAATC
GCCTTCACGG GAGAATATAA AACCGCCCAA ACGATTAAGC AGGCCACAGT CAACAGCATG
AAACGCCTGT CCTTTGAGCT GGGAGGTAAA AGCCCTAACA TCATCTTTAA TGATGCTAAT
CTCGAAGAAG CTATTACGGG TTCCTTTGGG GCTATTTTTC TAAATCAAGG ACAAAATTGT
TGTGCGGGTA GCCGCGCCTT TGTACAAAAC AATATTTATG ATGAATTCGT GGAGCAATTT
GCCGAGAAGG CAGCCAAGCG TAAACTGGGC GATCCCTTCG ATCCCGCTAC CGAGCATGGA
GCCCAGATCG ACAAGGCCCA GTTCGATAAA ATCATGCACT ATATCGCCCT TGGCAAGGAG
CAAGGCGCGG AATGTGTCAC CGGCGGCGAG CGGGCCTTTG AGCGAGGTTA TTTTATCCAA
CCCACCATCT TCAAGGAAGT CAATGAAAAT ATGGCCATCG CAACGGACGA GATTTTTGGG
CCAGTGGCTA GTGTGCTACG CTTCAAGAAC ATTAATGAGG TCATTGAAAA AGCCAATAAC
ACCCCGTTTG GCCTCGCGGC GGCCGTATGG ACCCAAGATA TCGACAAAGC CAACGCGGTA
GCCGCAGGGG TAAAAGCGGG AACCGTCTGG GTCAACTGCT ACAATATTGT CGATCCAGCG
GCGCCTTTTG GCGGCTTTAA ACTATCCGGG CTCGGCCGGG AACTAGGCGA ACAAGCCCTG
GATGCCTACA CGGAAACCAA AACGGTCACT GTATTGCGGA GGTAA
|
|---|
| Protein sequence | MSQSSPLPLT HKAQVEVRQT RLLIDGKFCD SLSGKTFATI DPATEEVIAQ VAEGDAEDID
LAVQAARKAF DSGPWHRMDA RERGRRMLKW ADLIEAHMEE LAKLEVLDNG KPINEALGYD
IPSAAATLRY FAGWADKIHG KTIPISGPFF TYTRREPVGV CGLIIPWNFP LAMAAWKLGP
ALATGCTAIL KPAEQTPLTA LRAGELALEA GIPPGVLNIV PGFGPTAGAA LVQHPLVEKI
AFTGEYKTAQ TIKQATVNSM KRLSFELGGK SPNIIFNDAN LEEAITGSFG AIFLNQGQNC
CAGSRAFVQN NIYDEFVEQF AEKAAKRKLG DPFDPATEHG AQIDKAQFDK IMHYIALGKE
QGAECVTGGE RAFERGYFIQ PTIFKEVNEN MAIATDEIFG PVASVLRFKN INEVIEKANN
TPFGLAAAVW TQDIDKANAV AAGVKAGTVW VNCYNIVDPA APFGGFKLSG LGRELGEQAL
DAYTETKTVT VLRR
|
|---|
| |