Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2588 |
Symbol | |
ID | 3704670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2941464 |
End bp | 2942705 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637739068 |
Product | HflK-like protein |
Protein accession | YP_344571 |
Protein GI | 77166046 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0268051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTGGA ATGAGCCGAA CGGGAACAAA GATAAAGATC CTTGGAATAA AGAAGGGGAT CAATGGGGCA AAGACGGCGA CCGGCAAGGT CCTCCGGATC TTGATGAAGT TATCCGCAAT CTAAAAGCCA AGCTTAGTGG GTTATTCGGT GGTAAGGGAG GTGGAGGCCC CGGTGGTGGC CGCCCAACTT TAGGCCGAGG GGGGAGCATT CTAGGATTAG CTCTATTAGT GCTAGTCCTT GCTGTAGCTT GGGGACTGTC GGGTATCTAT ATTGTTGCTC CTGCTGAGCG TGGAGTGGTA TTGCGATTTG GCGAATACGT TGCTACTACT GAGCCAGGAC CTCACTGGCA CATTCCTTAT CCTATTGAGA AGGTAGAGCT GGTTGATGTG GCGCAAATTC GAAGCTACGA GATTGGCTAC CGTTCTACGG GTAGAGGACA AGCCGGGTCA CCAGTGCCAA CCGAGGCGCT GATGCTCACC CAAGACGAAA ATATCGTAGA TGTTCGGATT GCAGTCCAAT ATCGAGTTAA AGATGCGGCT AATTATTTAT TTAATGTGCG TAATGCGGAT ACTAACCTAC GCCAAGTGGT CGAAAGCGCC CTTCGGGAGG CTGTGGGTAA AAGTAAAATG GATTTTGTTT TGACCGAAGG GCGCAGTGAT ATCGTGCTTC GTACAGAGGA ATTAGCGCAG CAGGTTTTGG ATCAATACCA TGCAGGGCTG ATTATCACCA GTGTCAACAT GCAAGATGCT CAACCGCCAG AACAAGTGCA GGCGGCCTTT GCGGATGCCA TTAAGGCGCG GGAAGATCAG CAACGACTAA GAAACGAGGC CGAGGCGTAC GCCAATGATA TTATCCCTAG AGCACGTGGT GCCGCTTTCC GTAAGGTCCA GGAGGCGGAA GCTTATAAAA GCGAAGTTGT TGCCCTTGCG GGAGGTGAGA CAGCCCGCTT TGAGCAGGTG TTGAAAGAAT ACCTAGATGC GCCGGAAATT ACTGAAAAAC GGCTTTATTT GGAAACCATG GAAACGGTAA TGGAGCGCAG CCGCAAAGTT TTGGTGGACG TACCTGAGGG CACTAATGTC TTTTATCTTC CTCTGGACCG TATGGTAAAC GAGGGAAATC CTAAGGAGCA GCGTCTTATT TCTCTTGATC GGTTATCTTC TTTTAACAGT GAAACCTCGG CCAGTGAGGA GCAGAGACGC CAGAATAGCA ATGATGATAG CCGGAGTCGG AGGGGACGAT GA
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Protein sequence | MAWNEPNGNK DKDPWNKEGD QWGKDGDRQG PPDLDEVIRN LKAKLSGLFG GKGGGGPGGG RPTLGRGGSI LGLALLVLVL AVAWGLSGIY IVAPAERGVV LRFGEYVATT EPGPHWHIPY PIEKVELVDV AQIRSYEIGY RSTGRGQAGS PVPTEALMLT QDENIVDVRI AVQYRVKDAA NYLFNVRNAD TNLRQVVESA LREAVGKSKM DFVLTEGRSD IVLRTEELAQ QVLDQYHAGL IITSVNMQDA QPPEQVQAAF ADAIKAREDQ QRLRNEAEAY ANDIIPRARG AAFRKVQEAE AYKSEVVALA GGETARFEQV LKEYLDAPEI TEKRLYLETM ETVMERSRKV LVDVPEGTNV FYLPLDRMVN EGNPKEQRLI SLDRLSSFNS ETSASEEQRR QNSNDDSRSR RGR
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