| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2581 |
|---|
| Symbol | |
|---|
| ID | 3704663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2934230 |
|---|
| End bp | 2935498 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637739061 |
|---|
| Product | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 |
|---|
| Protein accession | YP_344564 |
|---|
| Protein GI | 77166039 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAT CTTTTCCTCC CTATGATGTT CTGATCGTCG GTGCTGGCCT AATAGGTTCC
TGTTTAGCAT TAGCGCTAGG GCAATCTCCC AAGCTCAGAA TTGCCTTGGT AGAGTCAAAT
CCACCTGATC TCGGGGATGT CCTTCAGGGT ACTTATGACC TTCGGGTTAG GGCTATTAGC
CGCGCTTCCG AGAATATTTT TAAAAATCTG GATGCTTGGC AAGGAATGGC AGCACAACGC
ATCAGCCCCT TTCGGGAAAT GCACGTGTGG GATGGTACTG GGAGCGGGGA AATCCATTTT
GACAGTGCCG AAATAGGAGA ACCTCATTTA GGGCACATTA TTGAGAATCA GGTAATCCAA
AACGCTCTTC TAAAGCAATG CCAGAATTTA AATAATATTG ATCTTTATAC CCCTGTCCAA
GCATGTGGAA TCATCCAGCA TGAGCAGAAA ATTTATTTGC AGCTAGCGGA AGGCCAACGT
TTAGGTGCGC GCGTGCTCAT CGGCGCAGAT GGCACTAATT CTCGGGTAAG GCAATGGGCG
GGTATTAGCA ACCGGGGTTG GGATTATCAG CAAAAAGGGT TAGTCGCCAC GGTGCAGACG
GAAAAACCAC ATCAGGAAAC TGCGTGGCAA TGCTTCCTTC CCCATGGGCC TCTCGCTTTT
TTGCCGCTAG ATAACCCCTA TTATTGCTCT ATTGTCTGGA GCACGACGCC AGAAGAAGCT
ACTCGCTTAC TAGCTTTGGA GGATCAGGAA TTTACCACGG CGCTAGCTGC CGCTTTCGAG
TACCGCCTAG GCGCGATTGA AGCGCTTGGC CCACGCGCCG CTTTCCCCCT GCGGCTACGG
CATGCGGAGA CCTATATTCA ACCTCGCCTA GCCCTTGTTG GGGATGCCGC CCATACGATT
CATCCCCTAG CTGGACAGGG CGCTAACTTA GGGTTACTAG ATGCCGCCAC CCTAGCAGAA
GTACTGATTG CTGCCCAAAG GCGTAAAAAA GACCTAGGTA GTTTAGCTGT ATTGCGGCGC
TTTGAGCGGT GGCGGAAAGG GGATAATCTT GCCACCCAAT TGGTTATGGA TGGATTTAAA
CGTCTTTTTG GTGATACTCA ATTTCCAACG CGGCTAATTC GTAATTTTGG TCTCATCACC
ACTAATGCGG CAACCCCCAT CAAGTGTCTG ATCATGCGCC GGGCCTCTGG CTTAACGGGT
GATTTTCCCC TTCTCGCCAA ACCAGGCGTT ATAAAATCCT GGGGTATGGA CACCAGCAAC
TACGTATGA
|
|---|
| Protein sequence | MTSSFPPYDV LIVGAGLIGS CLALALGQSP KLRIALVESN PPDLGDVLQG TYDLRVRAIS
RASENIFKNL DAWQGMAAQR ISPFREMHVW DGTGSGEIHF DSAEIGEPHL GHIIENQVIQ
NALLKQCQNL NNIDLYTPVQ ACGIIQHEQK IYLQLAEGQR LGARVLIGAD GTNSRVRQWA
GISNRGWDYQ QKGLVATVQT EKPHQETAWQ CFLPHGPLAF LPLDNPYYCS IVWSTTPEEA
TRLLALEDQE FTTALAAAFE YRLGAIEALG PRAAFPLRLR HAETYIQPRL ALVGDAAHTI
HPLAGQGANL GLLDAATLAE VLIAAQRRKK DLGSLAVLRR FERWRKGDNL ATQLVMDGFK
RLFGDTQFPT RLIRNFGLIT TNAATPIKCL IMRRASGLTG DFPLLAKPGV IKSWGMDTSN
YV
|
|---|
| |