Gene Noc_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2578 
Symbol 
ID3704582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2931110 
End bp2931640 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content46% 
IMG OID637739058 
Producthypothetical protein 
Protein accessionYP_344561 
Protein GI77166036 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.737832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACA TTTATTCAAA GCTTTTGGAG GCTCTCCGTA ATCTTGACTC CTATGCAGAT 
CTTCCCGAGA TTCATGGGTC TTTGTGCGGA TTTCTTTGCG CCAGAAAAAA CCAAACCGCT
AAAACTTGGG CCGAAGAAAT TGCACCCCAA GCCAGTAACA ACGATAAAAA AAAGCTGGAA
GCGCTATTTG AATTCACCGA GCAGCAAATT AATAGCCCCG ATTTAGATAT TCGCCTTTTG
CTCCCTGATG ATGAACAATC CCTTAATCAG CGAACTGAGG CCCTTGCCAG TTGGTCGCGA
GGACTCCTAT ATGGTTTAGG TATTGGCGGC CTAAGAAAAG AAACTGTCCT AGACGGCGAT
ACCCAGGAAT TCCTCAAAGA TGCCGCAAAG ATTGCAAAAA TGGTACATTT TCCTAGCAAT
GACTCCCAGG AAGATGAAGC AGCCTATAAT GAGATTGTCG AATACCTCCG CATGGGACTA
TTGCTATTGT ATGAAAGTCT TCACCCCGCT GATAGCGGCC CCTCCCTTTA A
 
Protein sequence
MADIYSKLLE ALRNLDSYAD LPEIHGSLCG FLCARKNQTA KTWAEEIAPQ ASNNDKKKLE 
ALFEFTEQQI NSPDLDIRLL LPDDEQSLNQ RTEALASWSR GLLYGLGIGG LRKETVLDGD
TQEFLKDAAK IAKMVHFPSN DSQEDEAAYN EIVEYLRMGL LLLYESLHPA DSGPSL