| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2569 |
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| Symbol | |
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| ID | 3704573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2920559 |
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| End bp | 2922484 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637739049 |
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| Product | peptidase M41, FtsH |
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| Protein accession | YP_344552 |
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| Protein GI | 77166027 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000845189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGACA TGGCAAAAAA TATTATTTTG TGGGTAGTGA TTGCCCTAGT ACTGATGTCG
GTTTTTAACA GCTTCGACAC GCGTCAGGTA AGCGGCCATC ATATCGATTA CTCTCGATTC
ATCGCCGATG TTAAAAGTGG GCAAGTGAAT AAAGTGGTGA TCGACGGGCG TCACATCAGT
GGTGAAACAA GCGAAGGGAA ACACTTTACA ACCTATAGTC CAGGTAATGA TCCAGGTTTG
ATCGGCGATC TCTTGGGTAA TGGTGTTGTT ATTGAAGCCA AGCCAGAAGA GGGAACAGGG
CTTTTGATGC AGGTTTTTAT CTCTTGGTTC CCTATGTTAT TGCTCATTGC AGTATGGATT
TTTTTCATGC GGCAGATGCA GGGCGGAGCT GGAGGCCGTG GAGCAATGTC GTTTGGTAAA
AGCCGTGCTC GCATGCTGAG CGAAGAGCAG GTGAAAGTTA CCTTTAGTGA TGTTGCTGGA
TGTGACGAAG CAAAGGAAGA AGTTCAGGAA TTGGTAGAGT TCTTGCGCGA GCCCGGTCGT
TTTCAAAAAT TAGGAGGTAA AATTCCTCGG GGCGTGCTTA TGGTAGGACC GCCAGGAACA
GGAAAAACCT TATTGGCAAG GGCGATTGCT GGCGAAGCCA AAGTCCCCTT CTTCACCATT
TCCGGCTCTG ATTTTGTGGA AATGTTTGTG GGCGTGGGCG CCTCGCGAGT GCGAGATATG
TTTGAGAACG CCAAAAAGCA CGCGCCTTGC ATTATTTTCA TCGACGAAAT TGATGCCGTT
GGGCGTCAGC GCGGTGCCGG CCTTGGAGGC GGCCATGATG AGCGGGAGCA AACCCTCAAT
CAAATGCTGG TGGAGATGGA TGGGTTTGAA GGCAACGAAG GCGTTATTGT TATTGCTGCG
ACCAACCGCC CTGATGTGCT GGATCCGGCT CTGTTGCGGC CAGGACGCTT TGATCGGCAG
GTTGTGGTTT CTCTCCCAGA TATCCGAGGG CGAGCGCAAA TCCTTAAAGT TCACCTTCGT
AAGGTCCCAG TCGCGGAAGA TGTGGAGCCG GCCCTCATTG CACGAGGTAC CCCGGGTTTC
TCTGGCGCCG ATCTTGCTAA CTTGGTCAAT GAGGCCGCTC TGTTTGCCGC TCGTGGCAGC
AAGCGCTTGG TCGATATGCA AGACTTGGAG CAAGCCAAGG ATAAAATCCT GATGGGTGTC
GAACGGCGTT CAGCAGTGAT GAGTGAGGAC GACAAGAGGC TCACTGCTTA TCATGAAGCT
GGGCACGCTA TCATTGGCCG TTTGGTACCC TCGCACGATC CAGTTTACAA GGTAAGCATT
ATCCCTCGGG GCCGAGCGCT AGGCGTTACT ATGTTCTTGC CGGAAGAAGA TCGCTACAGC
CTGAGCAAGC TACAGATAGA GAGTCAGATT TCCAGCCTCT TTGGCGGGCG CTTAGCTGAA
GAATTGATCT TTGGCGTGGA GTACGTAACT ACGGGAGCTT CTAATGATAT CCAGCGTGCT
ACCGAGTTAG CCCGTAATAT GGTGACTAAA TGGGGACTTT CGGAAAAGCT GGGCCCACTG
GCCTATGGCG AAGAGGAAGG CGAAGTGTTT CTGGGACATT CTGTGACCCA GCATAAGGGT
ATTGCGGATA CGACGGCTTC AGAAATTGAT ACCGAAATAC GGGCTATTAT TGACCGCAAT
TACCTGCGGG CAAAACAGCT CTTAGAGGAG AATATGGACA AATTGCACGT TATGTCCGAT
GCTCTAATGA AATATGAAAC CATTGATAAG GAACAAATTG ATGACATTAT GGCTGGTAAA
GAACCACGAC CACCTAAAGT AAGCGGGTCT GATGTGGAAC CGCCCAGTGG GAGTGATGCA
GTGCCACCTA AAGGGAAGGA AGAACAGCCT GTAGGGGGGG GATCTATCCC TGCTAGCCAG
CATTAA
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| Protein sequence | MSDMAKNIIL WVVIALVLMS VFNSFDTRQV SGHHIDYSRF IADVKSGQVN KVVIDGRHIS
GETSEGKHFT TYSPGNDPGL IGDLLGNGVV IEAKPEEGTG LLMQVFISWF PMLLLIAVWI
FFMRQMQGGA GGRGAMSFGK SRARMLSEEQ VKVTFSDVAG CDEAKEEVQE LVEFLREPGR
FQKLGGKIPR GVLMVGPPGT GKTLLARAIA GEAKVPFFTI SGSDFVEMFV GVGASRVRDM
FENAKKHAPC IIFIDEIDAV GRQRGAGLGG GHDEREQTLN QMLVEMDGFE GNEGVIVIAA
TNRPDVLDPA LLRPGRFDRQ VVVSLPDIRG RAQILKVHLR KVPVAEDVEP ALIARGTPGF
SGADLANLVN EAALFAARGS KRLVDMQDLE QAKDKILMGV ERRSAVMSED DKRLTAYHEA
GHAIIGRLVP SHDPVYKVSI IPRGRALGVT MFLPEEDRYS LSKLQIESQI SSLFGGRLAE
ELIFGVEYVT TGASNDIQRA TELARNMVTK WGLSEKLGPL AYGEEEGEVF LGHSVTQHKG
IADTTASEID TEIRAIIDRN YLRAKQLLEE NMDKLHVMSD ALMKYETIDK EQIDDIMAGK
EPRPPKVSGS DVEPPSGSDA VPPKGKEEQP VGGGSIPASQ H
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