Gene Noc_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2568 
Symbol 
ID3704572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2919605 
End bp2920465 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content50% 
IMG OID637739048 
Productdihydropteroate synthase 
Protein accessionYP_344551 
Protein GI77166026 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.032898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCATT GCGCATCTCC CCTGTCACGA TATCTTGACT GTGGGGGTAA GGTTCTCAAC 
CTTAATCGTC CCCAAGTTAT GGGGGTTCTC AACATCACCC CTGACTCTTT TTCCGACGGC
GGTAAATATC TGATTTTAGA GCAAGCCCTT CAGCGTGCGC ACCAGATGAT ACAAGAGGGG
GCGGCTATCA TCGATGTGGG TGGTGAATCA ACCCGCCCTG GTGCGGCCCC CGTCTCTGTA
GAAGAAGAAT TGCACCGGGT TATTCCTGTC ATCAAGGCTC TTAGCCGAGA AATTTCTATC
CCTCTTTCTA TTGATACTAG TAAACCCGAA ATAATGCGTG CTGCGGTTGC AGCGGGGGCC
GGTTTTATTA ATGATATTAA CGCGCTTCGG CAGGAGGGCG CGTTAGCAGC GGCTCGTGAG
CTGGGAGTAC CCATTTGTTT AATGCATATG CGGGGCAAGC CCCAGACCAT GCAGCAAAAT
CCTGCTTATG ATGATGTAGT GGAGGAAGTG CGGGGATTTT TGTTAGATCG GATAATTGCC
TGTGAACGGG GTGGCATTCC TAGGGAACGG CTACTTGTTG ATCCTGGCTT TGGTTTTGGC
AAGAAATCTG TCCATAACCT ATTGTTACTT AAGTACCTCC ACCGTATTTG TGAGCTTGGT
CTTCCCGTGT TGGTAGGGCT TTCGCGTAAG TCTCTTATTG GTACAATGCT ACAATTACCG
GTAGGAGAGC GCCTCTATGG TAGTTTAGCT CTGGCTACCT TAGCTGCTTG GCAAGGCGCT
ACCATGGTGC GGACCCATGA TGTTCAAGCG ACGATGCAAG TACTAGCTCT TTGCGATAGC
GCCCAAAAGG CAGAAGAATA A
 
Protein sequence
MAHCASPLSR YLDCGGKVLN LNRPQVMGVL NITPDSFSDG GKYLILEQAL QRAHQMIQEG 
AAIIDVGGES TRPGAAPVSV EEELHRVIPV IKALSREISI PLSIDTSKPE IMRAAVAAGA
GFINDINALR QEGALAAARE LGVPICLMHM RGKPQTMQQN PAYDDVVEEV RGFLLDRIIA
CERGGIPRER LLVDPGFGFG KKSVHNLLLL KYLHRICELG LPVLVGLSRK SLIGTMLQLP
VGERLYGSLA LATLAAWQGA TMVRTHDVQA TMQVLALCDS AQKAEE