| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2563 |
|---|
| Symbol | |
|---|
| ID | 3704566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2915173 |
|---|
| End bp | 2915868 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637739042 |
|---|
| Product | NADH (or F420H2) dehydrogenase, subunit C |
|---|
| Protein accession | YP_344546 |
|---|
| Protein GI | 77166021 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACA GTGTAGCGGA ATTACGAAGG CGTATTGAGG GCCGCTTCGA TGGTGAAATA
GGCTTCTGCC GCCTTGAACG CGGGGAACTC ACAATTGAGG TGCCCCGCGA ATTCTATTTT
GCGGTTTGTA AAGCGCTGCG AGATGAAGAG AATTTCGGCT TTGAACAGTT GATCGATTTA
TGTGGCGTGG ATTATATGGA ATATGGTCTT AGTGATTGGG AGACCAAAAA AGCTACGGTA
GACGGTTTTA GTCGTGCTGT GGAACGGAGG CAATACAAAA AACAGGCTTG GACCAGGTCG
CGTTTTGCCG TAGTCGTTCA CCTCCTTTCG GTGCGGCATA ACTGGCGTTT GCGAGTGCGA
ACTTTTGTGG ATGAAGAAAT CTTGGTAGCG CCTTCAGTGA TCCAGCTTTG GGCTTCGGTC
AATTGGTTCG AGCGCGAAGC TTTTGATTTA TTTGGTATTC TTTTTGAGGG TCATCCTGAT
CTTCGGCGTA TTTTGACGGA TTATGGTTTT ATCGGCCATC CTTTCCGTAA GGATTTCCCG
CTAAGCGGTA ATGTAGAAAT GCGCTACGAT CCTGAGCAGC AGCGAGTTAT CTACGAACCT
GTAAGTATTG AACCTCGAGT ACTGGTGCCT CGAGTGATTC GTGATGATCA CCGCTACCAA
ATCAAGGCTT CAGGGGACGA AGGCGGCCAT GGCTGA
|
|---|
| Protein sequence | MANSVAELRR RIEGRFDGEI GFCRLERGEL TIEVPREFYF AVCKALRDEE NFGFEQLIDL
CGVDYMEYGL SDWETKKATV DGFSRAVERR QYKKQAWTRS RFAVVVHLLS VRHNWRLRVR
TFVDEEILVA PSVIQLWASV NWFEREAFDL FGILFEGHPD LRRILTDYGF IGHPFRKDFP
LSGNVEMRYD PEQQRVIYEP VSIEPRVLVP RVIRDDHRYQ IKASGDEGGH G
|
|---|
| |