Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2562 |
Symbol | |
ID | 3704565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2913927 |
End bp | 2915180 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637739041 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_344545 |
Protein GI | 77166020 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGA TCCGGAATTT TACTCTTAAT TTTGGCCCGC AGCACCCAGC AGCCCATGGG GTTTTGCGGT TAGTGCTAGA AATGGATGGA GAGATTATCC AGCGGGCTGA TCCTCACGTG GGTCTGTTGC ATCGGGCTAC AGAAAAACTC GCTGAGAGCA AGCCGTTCAA TCAGAGCATC GGGTATATGG ACCGGTTAGA CTATGTGTCC ATGATGTGCA ATGAACACGG TTATGTGAAA GCGATTGAAA CACTCCTCGG CATTGAGCCA CCCTTACGGG CACAGTATAT TCGGACGATG TTCGATGAAA TTACCCGTAT TCTTAATCAT CTCATGTGGC TGGGTGCCCA TGGCCTAGAT ATCGGCGCCA TGACGGTGTT TTTATACTGC TTCCGGGAGC GGGAGGATCT TATGGACTGC TATGAAGCGG TTTCAGGAGC TCGTATGCAT GCGACTTATT ATCGTCCCGG TGGGGTTTAT CGCGACTTGC CGGAGACGAT GCCTGGATAT CAGCCTTCTA AGTGGCATAA CGAAAAAGAG GTGGCAATAA TTAATCGGAA TCGAGAGGGA TCTTTGCTTG ATTTTATTGA AGATTTTACC GCCCGCTTTC CTACTTGTGT GGATGAATAT GAAACCCTGT TGACGGATAA TCGAATCTGG AAACAGCGTA CGGTTGGCAT TGGAGTCGTC ACGCCGGAGC GTGCATTGCA ACTGGGTTTT ACGGGACCGA TGCTGCGTGG CTCGGGAGTG GAATGGGATT TACGGAAAAA ACAACCCTAT GCTGCGTATG ACCAAATAGA TTTTGATATT CCTGTGGGGG TTAACGGGGA CTGCTATGAC CGTTATTTGG TACGGATAGA AGAGATGCGC CAGTCCAACC AAATTATCAA GCAGTGCGTG GACTGGCTAC GAAAAAATCC TGGACCGGTT ATAGTGAATA ACTATAAGGT TGCTGCCCCC CCGCGGGAGA AAATGAAAAA TGATATGGAG GTGCTGATCC ATCATTTCAA GCTATTTACC GAAGGGTATT GCGTCCCGGA AGGTGAAGCT TATGCGGCAG TAGAAGCACC CAAGGGTGAA TTTGGGGTTT ATCTTATCTC GGATGGGGCT AATAAACCCT ACCGGCTTAA AGTTCGAGCG CCGGGGTTTG CCCATTTAGC CGCTATGGAC GAAATGGTAC AAGGCCACAT GCTTGCCGAT GTGGTTGCCA TTATCGGAAC CATGGATATC GTGTTTGGGG AGATCGATCG GTGA
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Protein sequence | MAEIRNFTLN FGPQHPAAHG VLRLVLEMDG EIIQRADPHV GLLHRATEKL AESKPFNQSI GYMDRLDYVS MMCNEHGYVK AIETLLGIEP PLRAQYIRTM FDEITRILNH LMWLGAHGLD IGAMTVFLYC FREREDLMDC YEAVSGARMH ATYYRPGGVY RDLPETMPGY QPSKWHNEKE VAIINRNREG SLLDFIEDFT ARFPTCVDEY ETLLTDNRIW KQRTVGIGVV TPERALQLGF TGPMLRGSGV EWDLRKKQPY AAYDQIDFDI PVGVNGDCYD RYLVRIEEMR QSNQIIKQCV DWLRKNPGPV IVNNYKVAAP PREKMKNDME VLIHHFKLFT EGYCVPEGEA YAAVEAPKGE FGVYLISDGA NKPYRLKVRA PGFAHLAAMD EMVQGHMLAD VVAIIGTMDI VFGEIDR
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