| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2560 |
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| Symbol | |
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| ID | 3704563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2912123 |
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| End bp | 2913406 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637739039 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_344543 |
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| Protein GI | 77166018 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.652928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCTC TCAACCAAGT CTGTTTTCGC ACATTGGATC TCGACCCTCC GTGGGGATTG
GAAAGTTATC TAAAGGTAAA GGGGTATGAA GTTTGGAAAC GCATTCTGAG AGAAAAAACT
CCGCCTTCCA AGATCATTGA TGAGATCAAA GCTTCTGGTC TTCGAGGTCG TGGAGGGGCG
GGATTTCCCA CGGGATTGAA ATGGAGTTTT ATGCCCAAGG ATTTAGCAGG TATCAAATAT
ATTGTTTGTA ATTCCGATGA GGGGGAGCCG GGTACCTTCA AAGACCGGGA TATTCTTCGC
TATAACCCCC ATCAGTTGAT TGAAGGGATG GCCATTGCGG GTTATGCCAT TGGCGCAGCA
GTAGGTTATA ACTATACCCG CGGTGAGTTT AGCGAGCCCA TTGAACGTTT TGAAGCGGCC
TTGGAGGAGG CTTATCAGGC GGGCCTGCTG GGCAAAAATA TCCTGGCATC AGGAGTCGAC
TTCGATCTCT ACTCCCATCC CGGCGCGGGG GCTTATATTT GTGGCGAGGA GACGGCTTTG
CTGGAATCCC TAGAGGGCAA AAAAGGCATG CCTCGCTATA AGCCGCCGTT TCCCGCTGGC
TTTGGCCTCT ATGGTAGACC TACAACCATT AATAATACCG AGACTCTTGC TTCGGTGCCC
GTGATTCTAG AAAAGGGGGG TCAATGGTTC TTGAAGTTGG GAACGCCAAC CAGCGGGGGA
ACCAAAATTT TTAGTGTCTC GGGGCATGTC AACCGGCCCG GTAATTATGA GGTCCCCATG
GGAATCTCAT TTAAAGACTT GCTTGAATTA GCAGGTGGGA TGCGTAATGG GAATGCCCTG
AAGGCGGTTA TTCCTGGAGG AACTTCCGTA CCGGTAATGC CTGCGGAGGC TATCATGGCC
GCTAATATGG ATTACGACTC CCTTGCCAAG GCTGGTTCGT TACTGGGTGC GGGTTCAGTC
ATCATTATGG ATGAAACAAC CTGTATGGTG CGGGCTCTGG AGCGGATCTC AGCCTTCTAT
CGCGAAGAAT CCTGTGGTCA ATGTACGCCT TGCCGGGAGG GGACGGGATG GCTATATCGA
GTGGTTCACC GCATTGAACA AGGCCAGGGT ACGCAAGAAG ATTTGGATAA GGTGGTCAAT
GTAGCCGAAA ATATTGATGG CCATACTATT TGCGCTCTGG GAGATGCCGC TGCGGCGCCA
GTAATAAGCT TTATCAAACA CTTCCGAGAT GAGTTTCAAT ATCACATCGA TCATAAGCGA
TGCTTAGTCG GAAGCGGGTC CTGA
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| Protein sequence | MIALNQVCFR TLDLDPPWGL ESYLKVKGYE VWKRILREKT PPSKIIDEIK ASGLRGRGGA
GFPTGLKWSF MPKDLAGIKY IVCNSDEGEP GTFKDRDILR YNPHQLIEGM AIAGYAIGAA
VGYNYTRGEF SEPIERFEAA LEEAYQAGLL GKNILASGVD FDLYSHPGAG AYICGEETAL
LESLEGKKGM PRYKPPFPAG FGLYGRPTTI NNTETLASVP VILEKGGQWF LKLGTPTSGG
TKIFSVSGHV NRPGNYEVPM GISFKDLLEL AGGMRNGNAL KAVIPGGTSV PVMPAEAIMA
ANMDYDSLAK AGSLLGAGSV IIMDETTCMV RALERISAFY REESCGQCTP CREGTGWLYR
VVHRIEQGQG TQEDLDKVVN VAENIDGHTI CALGDAAAAP VISFIKHFRD EFQYHIDHKR
CLVGSGS
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