| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2557 |
|---|
| Symbol | |
|---|
| ID | 3704560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2908183 |
|---|
| End bp | 2908671 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637739036 |
|---|
| Product | NADH dehydrogenase subunit I |
|---|
| Protein accession | YP_344540 |
|---|
| Protein GI | 77166015 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.840778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCC TGCGTTCGTA CATTAAGAGT TTTTTACTGT GGGAATTACT GCTGGGTCTT
AAATTGACTG GCCGTTATTT GTTCACAAAA AAGGTTACAG TCCAGTTCCC CGAAGAGCGG
ACGCCTCAAT CACCCCGGTT TCGCGGTCTC CATGCTTTAC GCCGCTATCC CAACGGTGAA
GAACGTTGCA TCGCTTGCAA ACTCTGTGAA GCGGTTTGTC CAGCGTTAGC GATTACCATC
GATTCCGAAC AACGGGAAGA CGGAACCCGT CGTACGACTC GTTATGATAT CGATCTTTTT
AAGTGTATTT ACTGCGGTTT TTGTGAGGAG TCCTGCCCGG TCGATTCTAT CGTGGAGACT
CGGATCCTTG ATTATCATTT TGAAGAGCGA GGCGAGCATA TTCTCCACAA AGAACAATTA
TTGGCGCTGG GTGACAAATA TGAAGCCCAA ATTGCTGCCG ATAGGGCCGC TGATGCACCT
TATCGTTAA
|
|---|
| Protein sequence | MNTLRSYIKS FLLWELLLGL KLTGRYLFTK KVTVQFPEER TPQSPRFRGL HALRRYPNGE
ERCIACKLCE AVCPALAITI DSEQREDGTR RTTRYDIDLF KCIYCGFCEE SCPVDSIVET
RILDYHFEER GEHILHKEQL LALGDKYEAQ IAADRAADAP YR
|
|---|
| |