| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2527 |
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| Symbol | |
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| ID | 3704683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2875633 |
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| End bp | 2879643 |
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| Gene Length | 4011 bp |
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| Protein Length | 1336 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637739006 |
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| Product | ribonucleoside-diphosphate reductase |
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| Protein accession | YP_344510 |
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| Protein GI | 77165985 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region
[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGG AATCCTCTAC TACTATGTCA TACCCCCAGG AACAGACTCA TGACCCCGAA
GCCCTGGACC CTACCGTCAG AGTCACGGCC CCTGGTCAAT ACCGAGTCAT TCGCCGCAAC
GGCAAAGTCA CTGGTTTTGA TCCCAGTAAA ATTGCCGTCG CTATGACCAA AGCCTTCCTG
GCGCTAGAAG GGAACGGCGC GGCAATGAGC AAACGCATCC ACCAAACGGT GGAAGTCTTG
ACGGAACAAG TGGTGGAAGC CTGTACCCGC CGTTTAGAGA CAGGGGGCAC CGTCCATATC
GAAGGTATCC AAGATCAGGT GGAACTCGCT CTCATGCGAG GGGGACACCA CAAAATAGCG
CGAGCCTACG TGCTCTACCG GGAAGAACGA GCCCGAGAGA GAGCCCAAAC CGCAGCCAAA
AATAAGAAAA AGACCATCGA ACCGCCCATC CAAGTAACTT TGGCTGACGG CCGAACTGCA
CCATTGGATA AAGCCCGGCT CACCCGAATT GTAGAAGAAG CTTGCCAGAA TTTACCGGAA
ACCCAGCCCC AGGCTATTAT CAACGAAACC TTGCGTAACC TTTTTGATGG CGTCGCGGAA
CAAGATGTGG AAAGGGCCCT CATCATGAGC GCCCGCACCT TCATCGAAAA AGAACCCAAT
TACAGTTACA CCACCGCCCG TCTATTGTTA GACAGTTTGC GCCGGGAGGC GCTTTCCTTC
ATCCATGGCA TGGAAACCCA TGCCACTCAG CAGGAAATGA TCGAACGCTA TCCAGAATAT
TTTGCTGCCT ATATCAGGCA AGGCGCTGAA ATACAATTGA TTGACAGCCG CCTTACCCAA
TACGATTTAA CCCGACTAGG CCAAGCCTTG CGGCCGGAAC GGGATTTTCA GTTCACTTAT
CTTGGCTTGC AAACCCTCTA CGACCGTTAT TTCATTCACT CCGGCGGTAC TCGTTTTGAG
TTGCCCCAAG CCTTTTTCAT GCGAGTTGCC ATGGGGCTAG CCATCAATGA AATTGAACGG
GAAGAGCGGG CCATCGAGTT CTATGAACTG TTGTCCTCCT TTGACTTTAT GAGCAGCACC
CCCACTTTAT TTAACTCAGG CTCCTTGAGA CCTCAGCTTT CCTCCTGTTA TTTAACCACC
GTGCCCGATG ACTTGGATGG GATTTATAGC GCCATCAAGG ACAATGCCCT GCTCTCCAAA
TATGCGGGCG GGCTCGGCAA CGACTGGACT CGGGTTCGGG GAATGGGCGC TCACATCAAA
GGGACCAACG GCAAATCCCA AGGCGTAGTG CCCTTTTTAA AGGTGACCAA TGATACTGCC
GTGGCGGTCA ATCAATGTCT TGCGCCAAAC ACTTTGGTAC ACACGGCCGA AGGAATAAAG
TCCATCAAAG CCATCCAGGC AGGGGATTTA GTCTTGAGTC AATGCGGCGA GTACCGGGAA
GTAACCCGCA AGTTTGCCTA TAATCAGACT GAAGCCATGG TGGAACTCAA TATCAAGCAC
GGTATCGAGC CACTCAAAGT CACCACTGGT CACCCTTTTT GGGCACTGCG CGGCGTACCC
ATGGAACAAT CCAGCTACCG AACCCTGTCC TGGCTTGCCC GCGGCAAAAT ACAACCTGAA
TGGGTCGAAG CCGGAAAGTT GTCCAAAGGG GATTATGTGG CCCAAGTAAT ACCGAAGGAG
ATAGTGCCGG TAGCTGATTT TACCGAAGAC GACGCTCGCC TATACGGTAT ATTGCTTGGC
GACGGGCACC TCTGTAAGAA GGGAGGGGAA TGGGGGGTTT CCGGTAACCC TCGGCGAGAC
CACCACCTCC AGTTCGTACG CCATTACCTA GAAGTGCGCG GAATTCACTA CTGGGAAATC
AGCCGCGGCA CTCGCTATGC TCAGATTCGT TGGGCCAGCG GCCGTGGTGC CGTTCGCAAT
GCCACCACCG GCCGCATCGT CGGCGCTGGC GCCCCTACTC TTCCATTTAC CCGCGACGAT
CTCTATGATC ACACCGAAAA CAAACGCATC CACCATCGGC TCAGTCACCT TCCCCGCCGC
CAGACCCTAG CCTTGGTACA GGGACTACTA GAAACTGACG GCGGTGTGAG TCGAAATAAG
GAGATCTATT TTACTAGTAC CTCATTTTTA CTTGCGGAGG GGCTACGCTA CCAACTATTG
CGCTTAGGCG TACCTACCGC TGGCCAATAC CGTGAACGCC AGCAGGGTCA CAGCGGCCAG
CGTAGCGATG GCAGTGAAAT CCGTTTTAAC GGTATCTGCC GAGCAGTGGA TGTGAGAATT
CCCGCCGTGT CTGAAATCGC GGAACGCCTC GGCTGCCGCG CACTCACCAA GCACAACTGG
ATCGAATATA ATGGTTTTCT ATTCACCCGC CTGCGCAGCG CACGTGATAT CTCCCCCCTA
CCCTTCGTCT ACGATCTCAA AGTCGAAGGT GATCCAAGCT ATATGACCAC TACAGCCCTA
GTTCACAACG GTGGCAAGCG CAAGGGCGCG GTCTGCGCCT ATCTGGAAAC CTGGCACATC
GATATCGAAG AATTCCTTGA GCTGCGCAAA AATACCGGTG ACGATCGCCG CCGTACCCAC
GACATGAATA CCGCTAACTG GGTGCCGGAC CTGTTTATGA AACGGGTAGC TGAAGACGGC
GGCTGGACTT TGTTTTCCCC CGACGAAACC CCGGATCTCC ATGACTTGGT AGGCCAAGCT
TTTGAAGCAG CCTATCTTGG CTATGAGGAC AAGGCTAGCC GTGGCGAAAT CAAGAATTTT
AAAAAGCGGC GTGCCGTGGA TCTATGGCGC AAAATGCTCT CCATGCTATT CGAGACAGGA
CATCCTTGGA TCGCCTTTAA AGACCCCTGT AATCTGCGTT CCCCCCAGCA GCATGCGGGC
GTGGTCCATT CCTCAAATTT ATGTACCGAA ATTACTCTGA ATACCTCCGA TGATGAAATC
GCAGTATGCA ATCTAGGCTC TATCAACCTC CCTCAACATC TGGATGAAGA CGGTCTTAAC
CTGCCTAAAT TGGAGAAAAC CATCACCACT GCCATGCGCA TGCTGGATAA TGTCATCGAT
TACAACTATT ACAGCGTACC CACGGCACGG CGCTCCAACC TGCGCCATCG GCCCGTCGGC
CTGGGCCTCA TGGGGTTTCA GGACGCCCTT TATAAACGCC GTATCCCCTA TGCCTCGGAA
GCCGCCGTGG AGTTCGCCGA CCACTCCATG GAGGCAATCA GTTACTATGC CATCAAGGCT
TCCAGCAACC TCGCCGCAGA ACGGGGCAGT TACCATACTT TCGAAGGTTC CCTCTGGAGC
CAGGGACTTC TGCCCATCGA TTCCATCAGC TTGCTCGAAG AAAGTCGTGG CAGTTACTTC
CAGCAAGACC GTTCCCACAC ACTGGACTGG GACAGCCTGC GGGAACAGGT CAAAACAGTG
GGTATGCGTA ATTCCAATTG CATGGCCATC GCCCCCACTG CGACGATTTC TAATATCTGC
GGCGTCAGCC AGTCTATTGA GCCGACTTAC CAAAATCTGT TCGTGAAATC CAACCTCTCA
GGCGAGTTTA CGGTGATTAA CCCCTACTTG GTCCAGGATC TGAAAGCCCA GAACTTATGG
GATGAGGTCA TGGTCAACGA CCTCAAATAC TTTGATGGTA GCGCCCAGCC CATTGACCGC
ATACCGGAGG AACTCAAAAC CCTCTATGCC ACCGCCTTCG AGATCGATCC CCGCTGGCTG
GTGGAGGCGG CCTCCCGCCG CCAAAAGTGG CTTGATCAGG CTCAAAGCCT CAACCTTTAT
ATGGCCGAAC CCAACGGTAA AAAGCTTGAT AACCTCTATA AGCTCGCCTG GGTGCGGGGC
CTCAAAACCA CTTATTATTT ACGCTCCCTG GGCGCTACCC ATGTGGAGAA GAGCACCATG
ACCTCGGACC AGGCGAACAA GCTTAATGCC GTCCAATCGG GCTATATTCA GAAATCGGAA
GCGCCGCAAG CTTGTTCCGT CCAGGACCCG GACTGCGAAG CCTGTCAATA G
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| Protein sequence | MKTESSTTMS YPQEQTHDPE ALDPTVRVTA PGQYRVIRRN GKVTGFDPSK IAVAMTKAFL
ALEGNGAAMS KRIHQTVEVL TEQVVEACTR RLETGGTVHI EGIQDQVELA LMRGGHHKIA
RAYVLYREER ARERAQTAAK NKKKTIEPPI QVTLADGRTA PLDKARLTRI VEEACQNLPE
TQPQAIINET LRNLFDGVAE QDVERALIMS ARTFIEKEPN YSYTTARLLL DSLRREALSF
IHGMETHATQ QEMIERYPEY FAAYIRQGAE IQLIDSRLTQ YDLTRLGQAL RPERDFQFTY
LGLQTLYDRY FIHSGGTRFE LPQAFFMRVA MGLAINEIER EERAIEFYEL LSSFDFMSST
PTLFNSGSLR PQLSSCYLTT VPDDLDGIYS AIKDNALLSK YAGGLGNDWT RVRGMGAHIK
GTNGKSQGVV PFLKVTNDTA VAVNQCLAPN TLVHTAEGIK SIKAIQAGDL VLSQCGEYRE
VTRKFAYNQT EAMVELNIKH GIEPLKVTTG HPFWALRGVP MEQSSYRTLS WLARGKIQPE
WVEAGKLSKG DYVAQVIPKE IVPVADFTED DARLYGILLG DGHLCKKGGE WGVSGNPRRD
HHLQFVRHYL EVRGIHYWEI SRGTRYAQIR WASGRGAVRN ATTGRIVGAG APTLPFTRDD
LYDHTENKRI HHRLSHLPRR QTLALVQGLL ETDGGVSRNK EIYFTSTSFL LAEGLRYQLL
RLGVPTAGQY RERQQGHSGQ RSDGSEIRFN GICRAVDVRI PAVSEIAERL GCRALTKHNW
IEYNGFLFTR LRSARDISPL PFVYDLKVEG DPSYMTTTAL VHNGGKRKGA VCAYLETWHI
DIEEFLELRK NTGDDRRRTH DMNTANWVPD LFMKRVAEDG GWTLFSPDET PDLHDLVGQA
FEAAYLGYED KASRGEIKNF KKRRAVDLWR KMLSMLFETG HPWIAFKDPC NLRSPQQHAG
VVHSSNLCTE ITLNTSDDEI AVCNLGSINL PQHLDEDGLN LPKLEKTITT AMRMLDNVID
YNYYSVPTAR RSNLRHRPVG LGLMGFQDAL YKRRIPYASE AAVEFADHSM EAISYYAIKA
SSNLAAERGS YHTFEGSLWS QGLLPIDSIS LLEESRGSYF QQDRSHTLDW DSLREQVKTV
GMRNSNCMAI APTATISNIC GVSQSIEPTY QNLFVKSNLS GEFTVINPYL VQDLKAQNLW
DEVMVNDLKY FDGSAQPIDR IPEELKTLYA TAFEIDPRWL VEAASRRQKW LDQAQSLNLY
MAEPNGKKLD NLYKLAWVRG LKTTYYLRSL GATHVEKSTM TSDQANKLNA VQSGYIQKSE
APQACSVQDP DCEACQ
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