Gene Noc_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2524 
Symbol 
ID3704719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2873217 
End bp2874095 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content50% 
IMG OID637739003 
Productdihydrodipicolinate synthase subfamily protein 
Protein accessionYP_344507 
Protein GI77165982 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCATG GCAGCATGGT TGCTTTGGTA ACACCGATGC ATCCCGACGG GGCCCTAGAC 
TGGGAAGGTT TACGGCGGTT GGTTGATTTC CATATAGAAA ACGGAACTGA TGCTATAGTA
ACGGTAGGGA CTACGGGAGA GTCTCCTACG CTGGAAGTAA AAGAGCATAT TCGGGTTATC
CGCGAGGTGG TGGATCAAGC CCAGGGGCGG TTGCCGGTAA TTGCGGGAAC GGGCGCTAAT
TCTACCCGTG AAGCTGAAGA GTTGACTCGG GCGGCCTTAG AGGCTGGTGC CGATGCTTGC
TTGCTCGTGG TTCCTTATTA TAATAGACCC ACTCAAGAAG GTTTATATCT CCATTTCAAA
GCTATTGCTG AAGCTGTCCC CATTCCCCAG ATTCTTTATA ATGTACCTAC CCGGACGGCG
TGCGATTTAT TGCCGGAAAC GGTAGCCCGT TTGGCGGATA TTTCCAATAT TGTTGGTATC
AAGGAGGCTA CGGAAGATAT TGCCCGAGGG CGCCAGATTC TAGAACTGTG TGGCGATAAA
CTCGATCTCT ATAGCGGTGA AGATAGTGCT GCTATGGAAT ATATGCTAAT AGGAGGTCGG
GGAACTATTT CGGTAACCGC CAATGTGGCG CCTAAGGCTG TGCATGAAAT GTGTACCGTG
GCGCTGCAGG GTAATCGCAA GGCTGCGGAG GCTATTAATA CTAGGTTATG CCCCCTCTAC
GCTGCTCTGT TTTCTGAAGT TAACCCTATT CCCGTGAAAT GGGCCTTGTA TGAGATGGGC
TTGATTGCCC AAGGTATTCG CTTACCCTTG ACCGTTTTGT CTGAACGTTA TCATGAATTG
CTACGGCAAG CATTACGCCA AGAGCAGATT CTGCAGTAA
 
Protein sequence
MFHGSMVALV TPMHPDGALD WEGLRRLVDF HIENGTDAIV TVGTTGESPT LEVKEHIRVI 
REVVDQAQGR LPVIAGTGAN STREAEELTR AALEAGADAC LLVVPYYNRP TQEGLYLHFK
AIAEAVPIPQ ILYNVPTRTA CDLLPETVAR LADISNIVGI KEATEDIARG RQILELCGDK
LDLYSGEDSA AMEYMLIGGR GTISVTANVA PKAVHEMCTV ALQGNRKAAE AINTRLCPLY
AALFSEVNPI PVKWALYEMG LIAQGIRLPL TVLSERYHEL LRQALRQEQI LQ