Gene Noc_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2521 
Symbol 
ID3704716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2870370 
End bp2871407 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content51% 
IMG OID637739000 
Productdihydroorotase 
Protein accessionYP_344504 
Protein GI77165979 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACAA CCCTACAACT GACTCGCCCT GATGATTGGC ATCTGCATTT GCGGGATGGA 
AAAATGCTAA CCGACATTGT TCCGGCCACG GGCCGCCGTT TCGCTCGGGC TATCATTATG
CCTAATCTGC GGCCACCTAT TACCACCACC ACACAAGCAC TGGCTTATCG AAAACGTATT
CTTGCAGCTC AGCCTAAAAA TTTAGACTTC GAACCCCTAA TGACCCTCTA TCTTACTGAT
AATACCATAC CTGAGGAAAT CACTCGCGCT CGGGACAGCG GGCATATCTA TGCGGTTAAA
TTATATCCTG CAGGGGCAAC CACTAATGCC GATTTTGGAG TTACCTGCTT GCACAAACTC
TATCCTGTAC TGGAAGCCTT GCAACAGCAG CAATTACCAT TATTAATCCA TGGCGAGGTG
ACTGATCCTG CAGTCGATAT CTTTGATCGG GAACGGGTCT TTATTGAGAG TCACCTCATT
CCGCTGCTCC ATGATTTTCC GGCCTTACGG GTAGTACTGG AGCACATTAC TACCCAAGAG
GCGGTGGACT TTATCGAGGC AGCGCCACCA AACATTGCCG CCACTATCAC CCCCCATCAC
CTGCTATTTA ACCGCAATGC CCTGTTAGCA GGGGGAATTC AACCCCATTA TTATTGCTTG
CCGGTACTCA AGCGGGAAAT CCATCGCCAA GCTTTGGTAG CCGCAGCTAC TAGCGGCAAC
CCCAAGTTCT TTCTAGGAAC AGATAGCGCG CCCCATGCCA AAACCGCTAA GGAAACAGCT
TGTGGCTGTG CCGGAATCTA CAGCAGTCAT GCCGCCCTGG AACTTTATGC TGAGGCTTTC
GAGGAAGCAA GCGCTTTGGA AAAGCTAGAG GCATTCGCCA GCTTTCATGG GCCTGATTTC
TATGGTTTGC CCCGCAACCA AGACACGGTG ACGCTCATCA AAACTCCATG GCAAGTGCCG
GAGAGCCTAC CTTATGGCGA TGATGCGTTA ATACCCTTGC GTGGGGGAAC GACGGTTGCC
TGGCGCCTTG CCGAGTAG
 
Protein sequence
MVTTLQLTRP DDWHLHLRDG KMLTDIVPAT GRRFARAIIM PNLRPPITTT TQALAYRKRI 
LAAQPKNLDF EPLMTLYLTD NTIPEEITRA RDSGHIYAVK LYPAGATTNA DFGVTCLHKL
YPVLEALQQQ QLPLLIHGEV TDPAVDIFDR ERVFIESHLI PLLHDFPALR VVLEHITTQE
AVDFIEAAPP NIAATITPHH LLFNRNALLA GGIQPHYYCL PVLKREIHRQ ALVAAATSGN
PKFFLGTDSA PHAKTAKETA CGCAGIYSSH AALELYAEAF EEASALEKLE AFASFHGPDF
YGLPRNQDTV TLIKTPWQVP ESLPYGDDAL IPLRGGTTVA WRLAE